Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nod1Q8BHB0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nod1Q8BHB0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.32■■□□□ 1
Nod1Q8BHB0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.32■■□□□ 1
Nod1Q8BHB0 Gm42569-201ENSMUST00000200539 472 ntBASIC21.32■■□□□ 1
Nod1Q8BHB0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.32■■□□□ 1
Nod1Q8BHB0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nod1Q8BHB0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Nod1Q8BHB0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Nod1Q8BHB0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nod1Q8BHB0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Nod1Q8BHB0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.31■■□□□ 1
Nod1Q8BHB0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nod1Q8BHB0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.31■■□□□ 1
Nod1Q8BHB0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Nod1Q8BHB0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.3■■□□□ 1
Nod1Q8BHB0 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.3■■□□□ 1
Nod1Q8BHB0 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.3■■□□□ 1
Nod1Q8BHB0 Gm7291-201ENSMUST00000199147 382 ntBASIC21.3■■□□□ 1
Nod1Q8BHB0 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.3■■□□□ 1
Nod1Q8BHB0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Nod1Q8BHB0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nod1Q8BHB0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Nod1Q8BHB0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.29■■□□□ 1
Nod1Q8BHB0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nod1Q8BHB0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nod1Q8BHB0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nod1Q8BHB0 Smad6-203ENSMUST00000179458 273 ntBASIC21.29■■□□□ 1
Nod1Q8BHB0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.29■■□□□ 1
Nod1Q8BHB0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nod1Q8BHB0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nod1Q8BHB0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Nod1Q8BHB0 Gm42642-201ENSMUST00000200683 355 ntBASIC21.28■■□□□ 1
Nod1Q8BHB0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.28■■□□□ 1
Nod1Q8BHB0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nod1Q8BHB0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nod1Q8BHB0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nod1Q8BHB0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nod1Q8BHB0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Nod1Q8BHB0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.27■■□□□ 1
Nod1Q8BHB0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Nod1Q8BHB0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.27■■□□□ 1
Nod1Q8BHB0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Nod1Q8BHB0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Nod1Q8BHB0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nod1Q8BHB0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.26■□□□□ 0.99
Nod1Q8BHB0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nod1Q8BHB0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Gm26571-201ENSMUST00000181399 666 ntBASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Nod1Q8BHB0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Nod1Q8BHB0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nod1Q8BHB0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Nod1Q8BHB0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nod1Q8BHB0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms