Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Depdc1bQ8BH88 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Depdc1bQ8BH88 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1bQ8BH88 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1bQ8BH88 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1bQ8BH88 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.92■■□□□ 1.1
Depdc1bQ8BH88 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1bQ8BH88 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1bQ8BH88 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1bQ8BH88 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1bQ8BH88 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1bQ8BH88 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.91■■□□□ 1.1
Depdc1bQ8BH88 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1bQ8BH88 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Depdc1bQ8BH88 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Depdc1bQ8BH88 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Depdc1bQ8BH88 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1bQ8BH88 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.89■■□□□ 1.09
Depdc1bQ8BH88 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
Depdc1bQ8BH88 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.89■■□□□ 1.09
Depdc1bQ8BH88 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1bQ8BH88 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1bQ8BH88 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1bQ8BH88 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Depdc1bQ8BH88 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1bQ8BH88 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1bQ8BH88 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1bQ8BH88 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1bQ8BH88 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1bQ8BH88 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Gm21956-201ENSMUST00000179946 522 ntBASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Depdc1bQ8BH88 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Depdc1bQ8BH88 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Depdc1bQ8BH88 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Depdc1bQ8BH88 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Depdc1bQ8BH88 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Depdc1bQ8BH88 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Depdc1bQ8BH88 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Depdc1bQ8BH88 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Depdc1bQ8BH88 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Depdc1bQ8BH88 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Depdc1bQ8BH88 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Depdc1bQ8BH88 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms