Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim23Q8BGX0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim23Q8BGX0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim23Q8BGX0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Trim23Q8BGX0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim23Q8BGX0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim23Q8BGX0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim23Q8BGX0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Trim23Q8BGX0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim23Q8BGX0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Trim23Q8BGX0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim23Q8BGX0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Gm27454-201ENSMUST00000185090 204 ntBASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.49■□□□□ 0.71
Trim23Q8BGX0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim23Q8BGX0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim23Q8BGX0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim23Q8BGX0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim23Q8BGX0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim23Q8BGX0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim23Q8BGX0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim23Q8BGX0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim23Q8BGX0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim23Q8BGX0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim23Q8BGX0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim23Q8BGX0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim23Q8BGX0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim23Q8BGX0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim23Q8BGX0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim23Q8BGX0 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms