Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.88■□□□□ 0.77
Ubp1Q811S7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Gm12922-201ENSMUST00000120626 809 ntBASIC19.87■□□□□ 0.77
Ubp1Q811S7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubp1Q811S7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ubp1Q811S7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubp1Q811S7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubp1Q811S7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ubp1Q811S7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ubp1Q811S7 Golgb1-201ENSMUST00000023534 498 ntBASIC19.86■□□□□ 0.77
Ubp1Q811S7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubp1Q811S7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubp1Q811S7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubp1Q811S7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.86■□□□□ 0.77
Ubp1Q811S7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubp1Q811S7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ubp1Q811S7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubp1Q811S7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubp1Q811S7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubp1Q811S7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ubp1Q811S7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Ubp1Q811S7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubp1Q811S7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubp1Q811S7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubp1Q811S7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ubp1Q811S7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubp1Q811S7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ubp1Q811S7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.83■□□□□ 0.77
Ubp1Q811S7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ubp1Q811S7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ubp1Q811S7 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.83■□□□□ 0.76
Ubp1Q811S7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Ubp1Q811S7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ubp1Q811S7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubp1Q811S7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubp1Q811S7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubp1Q811S7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ubp1Q811S7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubp1Q811S7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.8■□□□□ 0.76
Ubp1Q811S7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ubp1Q811S7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ubp1Q811S7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ubp1Q811S7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ubp1Q811S7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ubp1Q811S7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.8■□□□□ 0.76
Ubp1Q811S7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.8■□□□□ 0.76
Ubp1Q811S7 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.8■□□□□ 0.76
Ubp1Q811S7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ubp1Q811S7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.79■□□□□ 0.76
Ubp1Q811S7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.79■□□□□ 0.76
Ubp1Q811S7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubp1Q811S7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms