Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pkhd1l1Q80ZA4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pkhd1l1Q80ZA4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pkhd1l1Q80ZA4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pkhd1l1Q80ZA4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm12527-201ENSMUST00000117967 564 ntBASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.26□□□□□ -0.45
Pkhd1l1Q80ZA4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm4968-201ENSMUST00000071458 858 ntBASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
Pkhd1l1Q80ZA4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm22325-201ENSMUST00000158904 308 ntBASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pkhd1l1Q80ZA4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm11421-201ENSMUST00000122124 294 ntBASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkhd1l1Q80ZA4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pkhd1l1Q80ZA4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pkhd1l1Q80ZA4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pkhd1l1Q80ZA4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pkhd1l1Q80ZA4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pkhd1l1Q80ZA4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pkhd1l1Q80ZA4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pkhd1l1Q80ZA4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pkhd1l1Q80ZA4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pkhd1l1Q80ZA4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm12441-201ENSMUST00000121806 588 ntBASIC12.21□□□□□ -0.46
Pkhd1l1Q80ZA4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.21□□□□□ -0.46
Pkhd1l1Q80ZA4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pkhd1l1Q80ZA4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pkhd1l1Q80ZA4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms