Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nrde2Q80XC6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nrde2Q80XC6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nrde2Q80XC6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nrde2Q80XC6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nrde2Q80XC6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nrde2Q80XC6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.46■□□□□ 0.87
Nrde2Q80XC6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nrde2Q80XC6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nrde2Q80XC6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nrde2Q80XC6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nrde2Q80XC6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nrde2Q80XC6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nrde2Q80XC6 Gm26833-201ENSMUST00000180899 440 ntBASIC20.44■□□□□ 0.86
Nrde2Q80XC6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.44■□□□□ 0.86
Nrde2Q80XC6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nrde2Q80XC6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nrde2Q80XC6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nrde2Q80XC6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nrde2Q80XC6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nrde2Q80XC6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nrde2Q80XC6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nrde2Q80XC6 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.42■□□□□ 0.86
Nrde2Q80XC6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nrde2Q80XC6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nrde2Q80XC6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nrde2Q80XC6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nrde2Q80XC6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nrde2Q80XC6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
Nrde2Q80XC6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nrde2Q80XC6 Gm7291-201ENSMUST00000199147 382 ntBASIC20.4■□□□□ 0.86
Nrde2Q80XC6 Gm43060-201ENSMUST00000200621 289 ntBASIC20.4■□□□□ 0.86
Nrde2Q80XC6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nrde2Q80XC6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.4■□□□□ 0.86
Nrde2Q80XC6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nrde2Q80XC6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nrde2Q80XC6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Gm12251-201ENSMUST00000117893 792 ntBASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nrde2Q80XC6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nrde2Q80XC6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nrde2Q80XC6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Nrde2Q80XC6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nrde2Q80XC6 Gm42569-201ENSMUST00000200539 472 ntBASIC20.38■□□□□ 0.85
Nrde2Q80XC6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nrde2Q80XC6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nrde2Q80XC6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Gm10493-201ENSMUST00000097270 612 ntBASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nrde2Q80XC6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms