Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.74■□□□□ 0.75
Ubfd1Q78JW9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Ubfd1Q78JW9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ubfd1Q78JW9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.74■□□□□ 0.75
Ubfd1Q78JW9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.74■□□□□ 0.75
Ubfd1Q78JW9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.74■□□□□ 0.75
Ubfd1Q78JW9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubfd1Q78JW9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubfd1Q78JW9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Gm43173-201ENSMUST00000202246 593 ntBASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubfd1Q78JW9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.72■□□□□ 0.75
Ubfd1Q78JW9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ubfd1Q78JW9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.72■□□□□ 0.75
Ubfd1Q78JW9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubfd1Q78JW9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubfd1Q78JW9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.72■□□□□ 0.75
Ubfd1Q78JW9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.71■□□□□ 0.75
Ubfd1Q78JW9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubfd1Q78JW9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ubfd1Q78JW9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ubfd1Q78JW9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.71■□□□□ 0.75
Ubfd1Q78JW9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ubfd1Q78JW9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubfd1Q78JW9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.71■□□□□ 0.75
Ubfd1Q78JW9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubfd1Q78JW9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubfd1Q78JW9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubfd1Q78JW9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubfd1Q78JW9 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.66■□□□□ 0.74
Ubfd1Q78JW9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubfd1Q78JW9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubfd1Q78JW9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ubfd1Q78JW9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.66■□□□□ 0.74
Ubfd1Q78JW9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubfd1Q78JW9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubfd1Q78JW9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubfd1Q78JW9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Ubfd1Q78JW9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms