Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snrnp40Q6PE01 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snrnp40Q6PE01 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Snrnp40Q6PE01 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snrnp40Q6PE01 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Snrnp40Q6PE01 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.92■□□□□ 0.46
Snrnp40Q6PE01 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snrnp40Q6PE01 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Snrnp40Q6PE01 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snrnp40Q6PE01 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snrnp40Q6PE01 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Gm9988-201ENSMUST00000069786 435 ntBASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Snrnp40Q6PE01 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Snrnp40Q6PE01 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.88■□□□□ 0.45
Snrnp40Q6PE01 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Snrnp40Q6PE01 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Snrnp40Q6PE01 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Snrnp40Q6PE01 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Snrnp40Q6PE01 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Snrnp40Q6PE01 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Snrnp40Q6PE01 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Snrnp40Q6PE01 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Snrnp40Q6PE01 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.87■□□□□ 0.45
Snrnp40Q6PE01 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Snrnp40Q6PE01 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.87■□□□□ 0.45
Snrnp40Q6PE01 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.87■□□□□ 0.45
Snrnp40Q6PE01 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Snrnp40Q6PE01 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Snrnp40Q6PE01 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp40Q6PE01 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp40Q6PE01 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp40Q6PE01 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp40Q6PE01 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.85■□□□□ 0.45
Snrnp40Q6PE01 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.85■□□□□ 0.45
Snrnp40Q6PE01 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp40Q6PE01 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp40Q6PE01 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp40Q6PE01 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp40Q6PE01 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms