Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cachd1Q6PDJ1 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Gm18101-201ENSMUST00000215769 548 ntBASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cachd1Q6PDJ1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cachd1Q6PDJ1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Gm11643-201ENSMUST00000119578 864 ntBASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cachd1Q6PDJ1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cachd1Q6PDJ1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cachd1Q6PDJ1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cachd1Q6PDJ1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.42■□□□□ 0.86
Cachd1Q6PDJ1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.42■□□□□ 0.86
Cachd1Q6PDJ1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cachd1Q6PDJ1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cachd1Q6PDJ1 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.42■□□□□ 0.86
Cachd1Q6PDJ1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cachd1Q6PDJ1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cachd1Q6PDJ1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cachd1Q6PDJ1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.4■□□□□ 0.86
Cachd1Q6PDJ1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cachd1Q6PDJ1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cachd1Q6PDJ1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cachd1Q6PDJ1 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.4■□□□□ 0.86
Cachd1Q6PDJ1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cachd1Q6PDJ1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cachd1Q6PDJ1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cachd1Q6PDJ1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cachd1Q6PDJ1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Gm37856-201ENSMUST00000191634 999 ntBASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cachd1Q6PDJ1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cachd1Q6PDJ1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Cachd1Q6PDJ1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cachd1Q6PDJ1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cachd1Q6PDJ1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms