Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd47Q61735 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd47Q61735 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd47Q61735 Gm10232-201ENSMUST00000089221 720 ntBASIC18.33■□□□□ 0.52
Cd47Q61735 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd47Q61735 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Cd47Q61735 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd47Q61735 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd47Q61735 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cd47Q61735 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cd47Q61735 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd47Q61735 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd47Q61735 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd47Q61735 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd47Q61735 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd47Q61735 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd47Q61735 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Cd47Q61735 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd47Q61735 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.32■□□□□ 0.52
Cd47Q61735 Gm10399-202ENSMUST00000202768 748 ntBASIC18.32■□□□□ 0.52
Cd47Q61735 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cd47Q61735 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd47Q61735 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd47Q61735 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd47Q61735 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd47Q61735 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cd47Q61735 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd47Q61735 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cd47Q61735 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd47Q61735 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cd47Q61735 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd47Q61735 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd47Q61735 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cd47Q61735 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd47Q61735 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.31■□□□□ 0.52
Cd47Q61735 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cd47Q61735 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd47Q61735 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cd47Q61735 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.3■□□□□ 0.52
Cd47Q61735 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.3■□□□□ 0.52
Cd47Q61735 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd47Q61735 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Cd47Q61735 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd47Q61735 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cd47Q61735 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.29■□□□□ 0.52
Cd47Q61735 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd47Q61735 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.29■□□□□ 0.52
Cd47Q61735 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd47Q61735 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd47Q61735 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd47Q61735 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd47Q61735 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd47Q61735 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd47Q61735 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd47Q61735 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd47Q61735 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd47Q61735 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.28■□□□□ 0.52
Cd47Q61735 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Cd47Q61735 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.28■□□□□ 0.52
Cd47Q61735 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd47Q61735 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd47Q61735 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd47Q61735 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cd47Q61735 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.27■□□□□ 0.51
Cd47Q61735 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd47Q61735 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd47Q61735 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cd47Q61735 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Cd47Q61735 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd47Q61735 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd47Q61735 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd47Q61735 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cd47Q61735 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd47Q61735 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cd47Q61735 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd47Q61735 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd47Q61735 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd47Q61735 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cd47Q61735 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.25■□□□□ 0.51
Cd47Q61735 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd47Q61735 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cd47Q61735 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd47Q61735 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd47Q61735 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd47Q61735 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.24■□□□□ 0.51
Cd47Q61735 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cd47Q61735 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms