Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
Foxc1Q61572 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.7□□□□□ -0.06
Foxc1Q61572 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.7□□□□□ -0.06
Foxc1Q61572 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxc1Q61572 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxc1Q61572 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxc1Q61572 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxc1Q61572 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxc1Q61572 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxc1Q61572 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxc1Q61572 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxc1Q61572 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.69□□□□□ -0.06
Foxc1Q61572 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Foxc1Q61572 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.69□□□□□ -0.06
Foxc1Q61572 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxc1Q61572 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxc1Q61572 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Foxc1Q61572 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxc1Q61572 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Foxc1Q61572 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.68□□□□□ -0.06
Foxc1Q61572 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Foxc1Q61572 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Foxc1Q61572 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.68□□□□□ -0.06
Foxc1Q61572 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.68□□□□□ -0.06
Foxc1Q61572 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.68□□□□□ -0.06
Foxc1Q61572 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Foxc1Q61572 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Foxc1Q61572 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Foxc1Q61572 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxc1Q61572 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxc1Q61572 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Foxc1Q61572 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxc1Q61572 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.67□□□□□ -0.06
Foxc1Q61572 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxc1Q61572 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxc1Q61572 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.67□□□□□ -0.06
Foxc1Q61572 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxc1Q61572 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.66□□□□□ -0.06
Foxc1Q61572 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.66□□□□□ -0.06
Foxc1Q61572 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxc1Q61572 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Foxc1Q61572 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Foxc1Q61572 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Foxc1Q61572 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxc1Q61572 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.65□□□□□ -0.06
Foxc1Q61572 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.65□□□□□ -0.06
Foxc1Q61572 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxc1Q61572 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Foxc1Q61572 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.65□□□□□ -0.06
Foxc1Q61572 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Foxc1Q61572 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxc1Q61572 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.65□□□□□ -0.06
Foxc1Q61572 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxc1Q61572 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxc1Q61572 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Foxc1Q61572 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Foxc1Q61572 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.64□□□□□ -0.07
Foxc1Q61572 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Foxc1Q61572 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.64□□□□□ -0.07
Foxc1Q61572 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Foxc1Q61572 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxc1Q61572 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxc1Q61572 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxc1Q61572 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxc1Q61572 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.63□□□□□ -0.07
Foxc1Q61572 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Foxc1Q61572 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.63□□□□□ -0.07
Foxc1Q61572 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.63□□□□□ -0.07
Foxc1Q61572 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.63□□□□□ -0.07
Foxc1Q61572 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxc1Q61572 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.63□□□□□ -0.07
Foxc1Q61572 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Foxc1Q61572 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.63□□□□□ -0.07
Foxc1Q61572 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms