Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Hif1aQ61221 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hif1aQ61221 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hif1aQ61221 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hif1aQ61221 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hif1aQ61221 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hif1aQ61221 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hif1aQ61221 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Hif1aQ61221 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hif1aQ61221 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Hif1aQ61221 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hif1aQ61221 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hif1aQ61221 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hif1aQ61221 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.38■□□□□ 0.85
Hif1aQ61221 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hif1aQ61221 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hif1aQ61221 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hif1aQ61221 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.38■□□□□ 0.85
Hif1aQ61221 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Hif1aQ61221 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.37■□□□□ 0.85
Hif1aQ61221 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.37■□□□□ 0.85
Hif1aQ61221 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hif1aQ61221 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hif1aQ61221 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.36■□□□□ 0.85
Hif1aQ61221 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hif1aQ61221 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hif1aQ61221 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hif1aQ61221 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Hif1aQ61221 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hif1aQ61221 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hif1aQ61221 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hif1aQ61221 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hif1aQ61221 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hif1aQ61221 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hif1aQ61221 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hif1aQ61221 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hif1aQ61221 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hif1aQ61221 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hif1aQ61221 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hif1aQ61221 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hif1aQ61221 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hif1aQ61221 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hif1aQ61221 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hif1aQ61221 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hif1aQ61221 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.33■□□□□ 0.85
Hif1aQ61221 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hif1aQ61221 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Hif1aQ61221 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hif1aQ61221 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hif1aQ61221 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hif1aQ61221 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.32■□□□□ 0.84
Hif1aQ61221 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.32■□□□□ 0.84
Hif1aQ61221 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hif1aQ61221 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hif1aQ61221 Iqck-206ENSMUST00000208658 2891 ntBASIC20.32■□□□□ 0.84
Hif1aQ61221 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hif1aQ61221 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hif1aQ61221 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hif1aQ61221 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hif1aQ61221 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hif1aQ61221 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hif1aQ61221 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hif1aQ61221 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hif1aQ61221 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hif1aQ61221 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hif1aQ61221 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hif1aQ61221 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hif1aQ61221 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hif1aQ61221 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hif1aQ61221 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hif1aQ61221 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Hif1aQ61221 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.29■□□□□ 0.84
Hif1aQ61221 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hif1aQ61221 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hif1aQ61221 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hif1aQ61221 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Hif1aQ61221 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.28■□□□□ 0.84
Hif1aQ61221 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hif1aQ61221 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.28■□□□□ 0.84
Hif1aQ61221 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hif1aQ61221 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hif1aQ61221 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hif1aQ61221 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms