Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdf4Q61112 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.49■□□□□ 0.87
Sdf4Q61112 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdf4Q61112 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sdf4Q61112 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdf4Q61112 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Sdf4Q61112 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.48■□□□□ 0.87
Sdf4Q61112 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.48■□□□□ 0.87
Sdf4Q61112 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdf4Q61112 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sdf4Q61112 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdf4Q61112 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdf4Q61112 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sdf4Q61112 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdf4Q61112 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdf4Q61112 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
Sdf4Q61112 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdf4Q61112 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sdf4Q61112 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sdf4Q61112 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sdf4Q61112 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sdf4Q61112 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sdf4Q61112 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf4Q61112 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf4Q61112 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf4Q61112 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf4Q61112 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.46■□□□□ 0.87
Sdf4Q61112 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf4Q61112 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf4Q61112 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf4Q61112 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Sdf4Q61112 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.45■□□□□ 0.86
Sdf4Q61112 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
Sdf4Q61112 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Sdf4Q61112 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Sdf4Q61112 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf4Q61112 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Sdf4Q61112 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.44■□□□□ 0.86
Sdf4Q61112 Gm43530-201ENSMUST00000195920 274 ntBASIC20.44■□□□□ 0.86
Sdf4Q61112 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sdf4Q61112 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sdf4Q61112 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf4Q61112 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf4Q61112 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.43■□□□□ 0.86
Sdf4Q61112 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf4Q61112 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf4Q61112 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Sdf4Q61112 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.43■□□□□ 0.86
Sdf4Q61112 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf4Q61112 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf4Q61112 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf4Q61112 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf4Q61112 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sdf4Q61112 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf4Q61112 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.42■□□□□ 0.86
Sdf4Q61112 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf4Q61112 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf4Q61112 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf4Q61112 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf4Q61112 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf4Q61112 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf4Q61112 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf4Q61112 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.41■□□□□ 0.86
Sdf4Q61112 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sdf4Q61112 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Sdf4Q61112 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdf4Q61112 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sdf4Q61112 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.41■□□□□ 0.86
Sdf4Q61112 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdf4Q61112 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdf4Q61112 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdf4Q61112 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdf4Q61112 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sdf4Q61112 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.4■□□□□ 0.86
Sdf4Q61112 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms