Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tnfaip3Q60769 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tnfaip3Q60769 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Tnfaip3Q60769 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfaip3Q60769 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfaip3Q60769 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfaip3Q60769 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfaip3Q60769 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfaip3Q60769 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.98■□□□□ 0.63
Tnfaip3Q60769 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfaip3Q60769 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfaip3Q60769 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Tnfaip3Q60769 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.96■□□□□ 0.63
Tnfaip3Q60769 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfaip3Q60769 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfaip3Q60769 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.96■□□□□ 0.63
Tnfaip3Q60769 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfaip3Q60769 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfaip3Q60769 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfaip3Q60769 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfaip3Q60769 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.95■□□□□ 0.62
Tnfaip3Q60769 Gm45417-201ENSMUST00000209533 758 ntBASIC18.95■□□□□ 0.62
Tnfaip3Q60769 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tnfaip3Q60769 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfaip3Q60769 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfaip3Q60769 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Tnfaip3Q60769 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Gm43137-201ENSMUST00000198052 594 ntBASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfaip3Q60769 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.92■□□□□ 0.62
Tnfaip3Q60769 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tnfaip3Q60769 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfaip3Q60769 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfaip3Q60769 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfaip3Q60769 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.9■□□□□ 0.62
Tnfaip3Q60769 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.9■□□□□ 0.62
Tnfaip3Q60769 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfaip3Q60769 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Tnfaip3Q60769 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfaip3Q60769 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfaip3Q60769 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfaip3Q60769 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms