Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf43Q5NCP0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Gm40848-201ENSMUST00000221998 324 ntBASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf43Q5NCP0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Gm37179-201ENSMUST00000194862 823 ntBASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf43Q5NCP0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.64■□□□□ 0.9
Rnf43Q5NCP0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf43Q5NCP0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Rnf43Q5NCP0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.62■□□□□ 0.89
Rnf43Q5NCP0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.62■□□□□ 0.89
Rnf43Q5NCP0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf43Q5NCP0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf43Q5NCP0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Rnf43Q5NCP0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rnf43Q5NCP0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.62■□□□□ 0.89
Rnf43Q5NCP0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.62■□□□□ 0.89
Rnf43Q5NCP0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf43Q5NCP0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf43Q5NCP0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf43Q5NCP0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf43Q5NCP0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rnf43Q5NCP0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf43Q5NCP0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf43Q5NCP0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf43Q5NCP0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf43Q5NCP0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf43Q5NCP0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf43Q5NCP0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.58■□□□□ 0.88
Rnf43Q5NCP0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf43Q5NCP0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf43Q5NCP0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms