Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps13aQ5H8C4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps13aQ5H8C4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Vps13aQ5H8C4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps13aQ5H8C4 Mir6982-201ENSMUST00000184354 68 ntBASIC20.45■□□□□ 0.86
Vps13aQ5H8C4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.45■□□□□ 0.86
Vps13aQ5H8C4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Vps13aQ5H8C4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps13aQ5H8C4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.45■□□□□ 0.86
Vps13aQ5H8C4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Gm8520-201ENSMUST00000186517 868 ntBASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps13aQ5H8C4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13aQ5H8C4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.43■□□□□ 0.86
Vps13aQ5H8C4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13aQ5H8C4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Vps13aQ5H8C4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vps13aQ5H8C4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.43■□□□□ 0.86
Vps13aQ5H8C4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13aQ5H8C4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps13aQ5H8C4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Mir5133-201ENSMUST00000174955 77 ntBASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps13aQ5H8C4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps13aQ5H8C4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps13aQ5H8C4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps13aQ5H8C4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps13aQ5H8C4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps13aQ5H8C4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps13aQ5H8C4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Vps13aQ5H8C4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.4■□□□□ 0.86
Vps13aQ5H8C4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps13aQ5H8C4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps13aQ5H8C4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Vps13aQ5H8C4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.4■□□□□ 0.86
Vps13aQ5H8C4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps13aQ5H8C4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vps13aQ5H8C4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Vps13aQ5H8C4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vps13aQ5H8C4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps13aQ5H8C4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Vps13aQ5H8C4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Vps13aQ5H8C4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Gm13168-201ENSMUST00000121771 632 ntBASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Gm13234-201ENSMUST00000120010 747 ntBASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps13aQ5H8C4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms