Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC36.36■■■■□ 3.41
Pds5bQ4VA53 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC36.36■■■■□ 3.41
Pds5bQ4VA53 Gm43859-201ENSMUST00000200075 1412 ntBASIC36.36■■■■□ 3.41
Pds5bQ4VA53 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Pds5bQ4VA53 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC36.36■■■■□ 3.41
Pds5bQ4VA53 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC36.35■■■■□ 3.41
Pds5bQ4VA53 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC36.34■■■■□ 3.41
Pds5bQ4VA53 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Pds5bQ4VA53 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC36.34■■■■□ 3.41
Pds5bQ4VA53 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC36.34■■■■□ 3.41
Pds5bQ4VA53 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC36.34■■■■□ 3.41
Pds5bQ4VA53 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
Pds5bQ4VA53 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC36.34■■■■□ 3.41
Pds5bQ4VA53 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Pds5bQ4VA53 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
Pds5bQ4VA53 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Pds5bQ4VA53 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC36.32■■■■□ 3.41
Pds5bQ4VA53 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC36.32■■■■□ 3.4
Pds5bQ4VA53 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC36.32■■■■□ 3.4
Pds5bQ4VA53 Gm29241-201ENSMUST00000189260 1096 ntBASIC36.32■■■■□ 3.4
Pds5bQ4VA53 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC36.32■■■■□ 3.4
Pds5bQ4VA53 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Pds5bQ4VA53 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Pds5bQ4VA53 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC36.31■■■■□ 3.4
Pds5bQ4VA53 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
Pds5bQ4VA53 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Pds5bQ4VA53 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC36.3■■■■□ 3.4
Pds5bQ4VA53 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
Pds5bQ4VA53 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
Pds5bQ4VA53 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Pds5bQ4VA53 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC36.29■■■■□ 3.4
Pds5bQ4VA53 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
Pds5bQ4VA53 Gm20049-201ENSMUST00000219950 730 ntBASIC36.29■■■■□ 3.4
Pds5bQ4VA53 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC36.29■■■■□ 3.4
Pds5bQ4VA53 Gm10812-201ENSMUST00000099864 546 ntBASIC36.29■■■■□ 3.4
Pds5bQ4VA53 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC36.29■■■■□ 3.4
Pds5bQ4VA53 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC36.28■■■■□ 3.4
Pds5bQ4VA53 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC36.28■■■■□ 3.4
Pds5bQ4VA53 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Pds5bQ4VA53 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC36.28■■■■□ 3.4
Pds5bQ4VA53 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC36.28■■■■□ 3.4
Pds5bQ4VA53 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Pds5bQ4VA53 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Pds5bQ4VA53 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC36.27■■■■□ 3.4
Pds5bQ4VA53 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC36.27■■■■□ 3.4
Pds5bQ4VA53 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Pds5bQ4VA53 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Pds5bQ4VA53 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC36.25■■■■□ 3.39
Pds5bQ4VA53 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Pds5bQ4VA53 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC36.25■■■■□ 3.39
Pds5bQ4VA53 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Pds5bQ4VA53 AC130671.1-201ENSMUST00000227384 1237 ntBASIC36.25■■■■□ 3.39
Pds5bQ4VA53 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC36.24■■■■□ 3.39
Pds5bQ4VA53 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC36.24■■■■□ 3.39
Pds5bQ4VA53 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Pds5bQ4VA53 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Pds5bQ4VA53 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Pds5bQ4VA53 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC36.24■■■■□ 3.39
Pds5bQ4VA53 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Pds5bQ4VA53 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC36.23■■■■□ 3.39
Pds5bQ4VA53 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Pds5bQ4VA53 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Pds5bQ4VA53 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Pds5bQ4VA53 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC36.22■■■■□ 3.39
Pds5bQ4VA53 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
Pds5bQ4VA53 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Pds5bQ4VA53 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC36.22■■■■□ 3.39
Pds5bQ4VA53 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Pds5bQ4VA53 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC36.21■■■■□ 3.39
Pds5bQ4VA53 Mir6982-201ENSMUST00000184354 68 ntBASIC36.21■■■■□ 3.39
Pds5bQ4VA53 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC36.21■■■■□ 3.39
Pds5bQ4VA53 AC135637.1-201ENSMUST00000227750 365 ntBASIC36.21■■■■□ 3.39
Pds5bQ4VA53 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Pds5bQ4VA53 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Pds5bQ4VA53 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Pds5bQ4VA53 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Pds5bQ4VA53 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC36.2■■■■□ 3.39
Pds5bQ4VA53 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC36.2■■■■□ 3.39
Pds5bQ4VA53 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Pds5bQ4VA53 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
Pds5bQ4VA53 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Pds5bQ4VA53 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC36.2■■■■□ 3.38
Pds5bQ4VA53 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Pds5bQ4VA53 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC36.18■■■■□ 3.38
Pds5bQ4VA53 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC36.18■■■■□ 3.38
Pds5bQ4VA53 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
Pds5bQ4VA53 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC36.18■■■■□ 3.38
Pds5bQ4VA53 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC36.18■■■■□ 3.38
Pds5bQ4VA53 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
Pds5bQ4VA53 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC36.17■■■■□ 3.38
Pds5bQ4VA53 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
Pds5bQ4VA53 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC36.17■■■■□ 3.38
Pds5bQ4VA53 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Pds5bQ4VA53 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Pds5bQ4VA53 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Pds5bQ4VA53 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC36.16■■■■□ 3.38
Pds5bQ4VA53 Gm37856-201ENSMUST00000191634 999 ntBASIC36.16■■■■□ 3.38
Pds5bQ4VA53 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC36.16■■■■□ 3.38
Pds5bQ4VA53 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Pds5bQ4VA53 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC36.15■■■■□ 3.38
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms