Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsmem1Q3UQS2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.6■□□□□ 0.89
Lsmem1Q3UQS2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.6■□□□□ 0.89
Lsmem1Q3UQS2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Lsmem1Q3UQS2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Lsmem1Q3UQS2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lsmem1Q3UQS2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsmem1Q3UQS2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsmem1Q3UQS2 Gm13241-201ENSMUST00000094493 780 ntBASIC20.59■□□□□ 0.89
Lsmem1Q3UQS2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsmem1Q3UQS2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lsmem1Q3UQS2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsmem1Q3UQS2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsmem1Q3UQS2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lsmem1Q3UQS2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lsmem1Q3UQS2 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.58■□□□□ 0.89
Lsmem1Q3UQS2 Gm21956-201ENSMUST00000179946 522 ntBASIC20.58■□□□□ 0.89
Lsmem1Q3UQS2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsmem1Q3UQS2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsmem1Q3UQS2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lsmem1Q3UQS2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsmem1Q3UQS2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lsmem1Q3UQS2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.55■□□□□ 0.88
Lsmem1Q3UQS2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Lsmem1Q3UQS2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lsmem1Q3UQS2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsmem1Q3UQS2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsmem1Q3UQS2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsmem1Q3UQS2 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.54■□□□□ 0.88
Lsmem1Q3UQS2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.54■□□□□ 0.88
Lsmem1Q3UQS2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsmem1Q3UQS2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsmem1Q3UQS2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsmem1Q3UQS2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsmem1Q3UQS2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lsmem1Q3UQS2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.52■□□□□ 0.88
Lsmem1Q3UQS2 Mir6236-201ENSMUST00000184437 123 ntBASIC20.52■□□□□ 0.88
Lsmem1Q3UQS2 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.52■□□□□ 0.88
Lsmem1Q3UQS2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lsmem1Q3UQS2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lsmem1Q3UQS2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lsmem1Q3UQS2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lsmem1Q3UQS2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lsmem1Q3UQS2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lsmem1Q3UQS2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsmem1Q3UQS2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.51■□□□□ 0.87
Lsmem1Q3UQS2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.51■□□□□ 0.87
Lsmem1Q3UQS2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lsmem1Q3UQS2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsmem1Q3UQS2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.5■□□□□ 0.87
Lsmem1Q3UQS2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lsmem1Q3UQS2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsmem1Q3UQS2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lsmem1Q3UQS2 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.5■□□□□ 0.87
Lsmem1Q3UQS2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lsmem1Q3UQS2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsmem1Q3UQS2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.49■□□□□ 0.87
Lsmem1Q3UQS2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lsmem1Q3UQS2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsmem1Q3UQS2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsmem1Q3UQS2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsmem1Q3UQS2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsmem1Q3UQS2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsmem1Q3UQS2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsmem1Q3UQS2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms