Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.41■□□□□ 0.86
Usp30Q3UN04 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp30Q3UN04 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp30Q3UN04 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.41■□□□□ 0.86
Usp30Q3UN04 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp30Q3UN04 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp30Q3UN04 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp30Q3UN04 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp30Q3UN04 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Usp30Q3UN04 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp30Q3UN04 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp30Q3UN04 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp30Q3UN04 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Usp30Q3UN04 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Usp30Q3UN04 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp30Q3UN04 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.39■□□□□ 0.85
Usp30Q3UN04 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp30Q3UN04 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp30Q3UN04 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp30Q3UN04 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp30Q3UN04 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp30Q3UN04 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp30Q3UN04 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp30Q3UN04 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.37■□□□□ 0.85
Usp30Q3UN04 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp30Q3UN04 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp30Q3UN04 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp30Q3UN04 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp30Q3UN04 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp30Q3UN04 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp30Q3UN04 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp30Q3UN04 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp30Q3UN04 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp30Q3UN04 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp30Q3UN04 Gm43060-201ENSMUST00000200621 289 ntBASIC20.36■□□□□ 0.85
Usp30Q3UN04 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp30Q3UN04 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp30Q3UN04 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp30Q3UN04 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp30Q3UN04 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp30Q3UN04 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp30Q3UN04 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp30Q3UN04 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp30Q3UN04 Gm5874-201ENSMUST00000096101 508 ntBASIC20.35■□□□□ 0.85
Usp30Q3UN04 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Usp30Q3UN04 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp30Q3UN04 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Usp30Q3UN04 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp30Q3UN04 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp30Q3UN04 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp30Q3UN04 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp30Q3UN04 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp30Q3UN04 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp30Q3UN04 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp30Q3UN04 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp30Q3UN04 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp30Q3UN04 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp30Q3UN04 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp30Q3UN04 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp30Q3UN04 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Usp30Q3UN04 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp30Q3UN04 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp30Q3UN04 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp30Q3UN04 Smad6-203ENSMUST00000179458 273 ntBASIC20.32■□□□□ 0.84
Usp30Q3UN04 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.32■□□□□ 0.84
Usp30Q3UN04 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp30Q3UN04 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp30Q3UN04 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp30Q3UN04 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp30Q3UN04 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp30Q3UN04 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Usp30Q3UN04 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Usp30Q3UN04 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp30Q3UN04 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp30Q3UN04 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp30Q3UN04 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Usp30Q3UN04 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp30Q3UN04 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.3■□□□□ 0.84
Usp30Q3UN04 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms