Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Spg11Q3UHA3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.05■□□□□ 0.64
Spg11Q3UHA3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Spg11Q3UHA3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Spg11Q3UHA3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Spg11Q3UHA3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Spg11Q3UHA3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Spg11Q3UHA3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Spg11Q3UHA3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Gm7290-201ENSMUST00000104990 617 ntBASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Gm11643-201ENSMUST00000119578 864 ntBASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Gm12918-201ENSMUST00000120234 636 ntBASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Gm15710-201ENSMUST00000121821 636 ntBASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Gm5075-201ENSMUST00000196916 622 ntBASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.04■□□□□ 0.64
Spg11Q3UHA3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Spg11Q3UHA3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Spg11Q3UHA3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Spg11Q3UHA3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.02■□□□□ 0.64
Spg11Q3UHA3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.02■□□□□ 0.64
Spg11Q3UHA3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Spg11Q3UHA3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Spg11Q3UHA3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.02■□□□□ 0.63
Spg11Q3UHA3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Spg11Q3UHA3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Spg11Q3UHA3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Spg11Q3UHA3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Spg11Q3UHA3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Spg11Q3UHA3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Spg11Q3UHA3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Spg11Q3UHA3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.01■□□□□ 0.63
Spg11Q3UHA3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Spg11Q3UHA3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19■□□□□ 0.63
Spg11Q3UHA3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19■□□□□ 0.63
Spg11Q3UHA3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19■□□□□ 0.63
Spg11Q3UHA3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Spg11Q3UHA3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Spg11Q3UHA3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Spg11Q3UHA3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Spg11Q3UHA3 Gm6211-202ENSMUST00000167849 925 ntBASIC19■□□□□ 0.63
Spg11Q3UHA3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Spg11Q3UHA3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Spg11Q3UHA3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Spg11Q3UHA3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Spg11Q3UHA3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Spg11Q3UHA3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Spg11Q3UHA3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Spg11Q3UHA3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Spg11Q3UHA3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms