Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Carmil3Q3UFQ8 Gm40848-201ENSMUST00000221998 324 ntBASIC24.58■■□□□ 1.53
Carmil3Q3UFQ8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.58■■□□□ 1.53
Carmil3Q3UFQ8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Carmil3Q3UFQ8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Carmil3Q3UFQ8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Carmil3Q3UFQ8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Carmil3Q3UFQ8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Carmil3Q3UFQ8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Carmil3Q3UFQ8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 Gm7291-201ENSMUST00000199147 382 ntBASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Carmil3Q3UFQ8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Carmil3Q3UFQ8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.55■■□□□ 1.52
Carmil3Q3UFQ8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.55■■□□□ 1.52
Carmil3Q3UFQ8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
Carmil3Q3UFQ8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Carmil3Q3UFQ8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Carmil3Q3UFQ8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Gm26571-201ENSMUST00000181399 666 ntBASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Smad6-203ENSMUST00000179458 273 ntBASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.54■■□□□ 1.52
Carmil3Q3UFQ8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Carmil3Q3UFQ8 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Carmil3Q3UFQ8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.51■■□□□ 1.51
Carmil3Q3UFQ8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Carmil3Q3UFQ8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.5■■□□□ 1.51
Carmil3Q3UFQ8 Gm10849-201ENSMUST00000100397 618 ntBASIC24.5■■□□□ 1.51
Carmil3Q3UFQ8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.5■■□□□ 1.51
Carmil3Q3UFQ8 Gm42569-201ENSMUST00000200539 472 ntBASIC24.5■■□□□ 1.51
Carmil3Q3UFQ8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Carmil3Q3UFQ8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Carmil3Q3UFQ8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Carmil3Q3UFQ8 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.49■■□□□ 1.51
Carmil3Q3UFQ8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Carmil3Q3UFQ8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Carmil3Q3UFQ8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.49■■□□□ 1.51
Carmil3Q3UFQ8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Carmil3Q3UFQ8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC24.49■■□□□ 1.51
Carmil3Q3UFQ8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Carmil3Q3UFQ8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
Carmil3Q3UFQ8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Carmil3Q3UFQ8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms