Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hddc2Q3SXD3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hddc2Q3SXD3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hddc2Q3SXD3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Gm45364-201ENSMUST00000210883 159 ntBASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hddc2Q3SXD3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Gm11599-201ENSMUST00000118720 878 ntBASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hddc2Q3SXD3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Hddc2Q3SXD3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hddc2Q3SXD3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hddc2Q3SXD3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.63■□□□□ 0.57
Hddc2Q3SXD3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.63■□□□□ 0.57
Hddc2Q3SXD3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hddc2Q3SXD3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hddc2Q3SXD3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hddc2Q3SXD3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hddc2Q3SXD3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Hddc2Q3SXD3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hddc2Q3SXD3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hddc2Q3SXD3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hddc2Q3SXD3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hddc2Q3SXD3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hddc2Q3SXD3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms