Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Traf6P70196 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.89■□□□□ 0.77
Traf6P70196 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Traf6P70196 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Traf6P70196 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Traf6P70196 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Traf6P70196 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Traf6P70196 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Traf6P70196 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Traf6P70196 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Traf6P70196 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Traf6P70196 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.88■□□□□ 0.77
Traf6P70196 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Traf6P70196 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Traf6P70196 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Traf6P70196 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Traf6P70196 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Traf6P70196 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Traf6P70196 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Traf6P70196 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Traf6P70196 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Traf6P70196 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Traf6P70196 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.86■□□□□ 0.77
Traf6P70196 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Traf6P70196 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
Traf6P70196 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Traf6P70196 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Traf6P70196 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Traf6P70196 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Traf6P70196 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Traf6P70196 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Traf6P70196 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Traf6P70196 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.84■□□□□ 0.77
Traf6P70196 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Traf6P70196 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.84■□□□□ 0.77
Traf6P70196 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Traf6P70196 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Traf6P70196 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Traf6P70196 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.84■□□□□ 0.77
Traf6P70196 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Traf6P70196 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.83■□□□□ 0.77
Traf6P70196 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Traf6P70196 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.83■□□□□ 0.77
Traf6P70196 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Traf6P70196 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Traf6P70196 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.83■□□□□ 0.77
Traf6P70196 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Traf6P70196 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.82■□□□□ 0.76
Traf6P70196 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Traf6P70196 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Traf6P70196 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Traf6P70196 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Traf6P70196 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Traf6P70196 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Traf6P70196 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Traf6P70196 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.81■□□□□ 0.76
Traf6P70196 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Traf6P70196 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Traf6P70196 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Traf6P70196 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Traf6P70196 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.81■□□□□ 0.76
Traf6P70196 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Traf6P70196 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Traf6P70196 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Traf6P70196 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Traf6P70196 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Traf6P70196 Gm15546-201ENSMUST00000122095 826 ntBASIC19.8■□□□□ 0.76
Traf6P70196 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Traf6P70196 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Traf6P70196 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Traf6P70196 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.8■□□□□ 0.76
Traf6P70196 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Traf6P70196 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Traf6P70196 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.79■□□□□ 0.76
Traf6P70196 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Traf6P70196 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.79■□□□□ 0.76
Traf6P70196 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Traf6P70196 Gm10232-201ENSMUST00000089221 720 ntBASIC19.79■□□□□ 0.76
Traf6P70196 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.79■□□□□ 0.76
Traf6P70196 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Traf6P70196 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Traf6P70196 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Traf6P70196 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Traf6P70196 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.78■□□□□ 0.76
Traf6P70196 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.78■□□□□ 0.76
Traf6P70196 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Traf6P70196 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Traf6P70196 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Traf6P70196 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.77■□□□□ 0.76
Traf6P70196 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Traf6P70196 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Traf6P70196 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms