Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six5P70178 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Six5P70178 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.9■□□□□ 0.62
Six5P70178 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.9■□□□□ 0.62
Six5P70178 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Six5P70178 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six5P70178 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six5P70178 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six5P70178 Gm12922-201ENSMUST00000120626 809 ntBASIC18.89■□□□□ 0.61
Six5P70178 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.89■□□□□ 0.61
Six5P70178 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Six5P70178 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Six5P70178 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six5P70178 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six5P70178 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six5P70178 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six5P70178 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six5P70178 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six5P70178 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six5P70178 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Six5P70178 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Six5P70178 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six5P70178 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Six5P70178 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six5P70178 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six5P70178 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six5P70178 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.87■□□□□ 0.61
Six5P70178 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six5P70178 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six5P70178 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six5P70178 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Six5P70178 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six5P70178 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Six5P70178 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Six5P70178 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.86■□□□□ 0.61
Six5P70178 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six5P70178 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six5P70178 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.86■□□□□ 0.61
Six5P70178 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.86■□□□□ 0.61
Six5P70178 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.86■□□□□ 0.61
Six5P70178 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six5P70178 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Six5P70178 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six5P70178 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Six5P70178 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Six5P70178 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six5P70178 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six5P70178 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Six5P70178 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.85■□□□□ 0.61
Six5P70178 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
Six5P70178 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.85■□□□□ 0.61
Six5P70178 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six5P70178 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six5P70178 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six5P70178 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six5P70178 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six5P70178 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.84■□□□□ 0.61
Six5P70178 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six5P70178 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six5P70178 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six5P70178 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six5P70178 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six5P70178 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six5P70178 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six5P70178 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Six5P70178 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six5P70178 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six5P70178 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six5P70178 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.83■□□□□ 0.6
Six5P70178 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Six5P70178 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six5P70178 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Six5P70178 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six5P70178 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Six5P70178 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Six5P70178 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six5P70178 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six5P70178 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Six5P70178 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six5P70178 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six5P70178 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six5P70178 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six5P70178 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six5P70178 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Six5P70178 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Six5P70178 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six5P70178 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six5P70178 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.81■□□□□ 0.6
Six5P70178 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six5P70178 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six5P70178 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Six5P70178 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms