Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx1P63006 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lhx1P63006 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Lhx1P63006 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx1P63006 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Lhx1P63006 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lhx1P63006 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx1P63006 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Lhx1P63006 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx1P63006 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Lhx1P63006 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Lhx1P63006 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx1P63006 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx1P63006 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx1P63006 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx1P63006 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx1P63006 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.91■□□□□ 0.78
Lhx1P63006 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.91■□□□□ 0.78
Lhx1P63006 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lhx1P63006 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx1P63006 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx1P63006 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.9■□□□□ 0.78
Lhx1P63006 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx1P63006 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx1P63006 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx1P63006 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx1P63006 Mir7075-201ENSMUST00000184187 82 ntBASIC19.9■□□□□ 0.78
Lhx1P63006 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lhx1P63006 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
Lhx1P63006 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lhx1P63006 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx1P63006 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx1P63006 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Lhx1P63006 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Lhx1P63006 Mir6236-201ENSMUST00000184437 123 ntBASIC19.89■□□□□ 0.77
Lhx1P63006 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Lhx1P63006 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx1P63006 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx1P63006 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx1P63006 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx1P63006 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx1P63006 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx1P63006 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx1P63006 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx1P63006 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.88■□□□□ 0.77
Lhx1P63006 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Lhx1P63006 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.88■□□□□ 0.77
Lhx1P63006 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx1P63006 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx1P63006 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx1P63006 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Lhx1P63006 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx1P63006 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx1P63006 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx1P63006 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx1P63006 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx1P63006 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lhx1P63006 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.86■□□□□ 0.77
Lhx1P63006 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx1P63006 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.86■□□□□ 0.77
Lhx1P63006 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx1P63006 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lhx1P63006 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx1P63006 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx1P63006 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx1P63006 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx1P63006 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx1P63006 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Lhx1P63006 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.85■□□□□ 0.77
Lhx1P63006 Gm6139-201ENSMUST00000079261 882 ntBASIC19.85■□□□□ 0.77
Lhx1P63006 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lhx1P63006 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx1P63006 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx1P63006 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lhx1P63006 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
Lhx1P63006 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx1P63006 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx1P63006 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx1P63006 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx1P63006 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx1P63006 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx1P63006 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx1P63006 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx1P63006 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx1P63006 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.84■□□□□ 0.77
Lhx1P63006 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Lhx1P63006 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx1P63006 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx1P63006 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms