Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nub1P54729 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.71■■□□□ 1.07
Nub1P54729 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Nub1P54729 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nub1P54729 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nub1P54729 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nub1P54729 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Nub1P54729 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.7■■□□□ 1.06
Nub1P54729 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nub1P54729 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nub1P54729 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
Nub1P54729 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nub1P54729 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nub1P54729 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nub1P54729 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nub1P54729 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nub1P54729 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.7■■□□□ 1.06
Nub1P54729 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nub1P54729 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nub1P54729 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nub1P54729 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nub1P54729 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.69■■□□□ 1.06
Nub1P54729 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nub1P54729 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nub1P54729 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nub1P54729 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.68■■□□□ 1.06
Nub1P54729 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.68■■□□□ 1.06
Nub1P54729 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nub1P54729 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nub1P54729 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nub1P54729 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nub1P54729 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nub1P54729 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.67■■□□□ 1.06
Nub1P54729 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nub1P54729 Gm12922-201ENSMUST00000120626 809 ntBASIC21.67■■□□□ 1.06
Nub1P54729 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nub1P54729 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Nub1P54729 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nub1P54729 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nub1P54729 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.67■■□□□ 1.06
Nub1P54729 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nub1P54729 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nub1P54729 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.66■■□□□ 1.06
Nub1P54729 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.66■■□□□ 1.06
Nub1P54729 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nub1P54729 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nub1P54729 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.65■■□□□ 1.06
Nub1P54729 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Nub1P54729 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.65■■□□□ 1.06
Nub1P54729 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Nub1P54729 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nub1P54729 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nub1P54729 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Nub1P54729 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nub1P54729 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nub1P54729 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nub1P54729 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nub1P54729 Golgb1-201ENSMUST00000023534 498 ntBASIC21.64■■□□□ 1.05
Nub1P54729 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nub1P54729 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nub1P54729 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nub1P54729 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nub1P54729 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.63■■□□□ 1.05
Nub1P54729 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Nub1P54729 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nub1P54729 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Nub1P54729 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nub1P54729 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms