Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx3P48381 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx3P48381 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.2■□□□□ 0.5
Rfx3P48381 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx3P48381 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx3P48381 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx3P48381 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx3P48381 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx3P48381 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx3P48381 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx3P48381 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rfx3P48381 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx3P48381 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx3P48381 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rfx3P48381 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.19■□□□□ 0.5
Rfx3P48381 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx3P48381 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx3P48381 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rfx3P48381 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfx3P48381 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfx3P48381 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rfx3P48381 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.18■□□□□ 0.5
Rfx3P48381 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx3P48381 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx3P48381 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx3P48381 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rfx3P48381 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfx3P48381 Gm10399-202ENSMUST00000202768 748 ntBASIC18.17■□□□□ 0.5
Rfx3P48381 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx3P48381 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfx3P48381 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx3P48381 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rfx3P48381 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rfx3P48381 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rfx3P48381 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx3P48381 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx3P48381 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx3P48381 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx3P48381 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx3P48381 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx3P48381 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx3P48381 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx3P48381 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx3P48381 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx3P48381 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx3P48381 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rfx3P48381 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx3P48381 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx3P48381 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx3P48381 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx3P48381 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx3P48381 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Rfx3P48381 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx3P48381 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx3P48381 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.14■□□□□ 0.49
Rfx3P48381 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.14■□□□□ 0.49
Rfx3P48381 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rfx3P48381 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rfx3P48381 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx3P48381 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx3P48381 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rfx3P48381 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx3P48381 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rfx3P48381 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx3P48381 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx3P48381 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx3P48381 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.13■□□□□ 0.49
Rfx3P48381 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx3P48381 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.13■□□□□ 0.49
Rfx3P48381 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rfx3P48381 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx3P48381 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx3P48381 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx3P48381 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx3P48381 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx3P48381 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx3P48381 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.12■□□□□ 0.49
Rfx3P48381 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx3P48381 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx3P48381 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms