Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.27□□□□□ -0.29
Xcl1P47993 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Xcl1P47993 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Xcl1P47993 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Xcl1P47993 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Xcl1P47993 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.27□□□□□ -0.29
Xcl1P47993 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Xcl1P47993 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Xcl1P47993 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Xcl1P47993 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Xcl1P47993 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Xcl1P47993 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Xcl1P47993 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Xcl1P47993 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.25□□□□□ -0.29
Xcl1P47993 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Xcl1P47993 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC13.25□□□□□ -0.29
Xcl1P47993 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Xcl1P47993 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Xcl1P47993 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Xcl1P47993 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.24□□□□□ -0.29
Xcl1P47993 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.24□□□□□ -0.29
Xcl1P47993 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Xcl1P47993 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 AC164433.2-201ENSMUST00000226346 1701 ntBASIC13.24□□□□□ -0.29
Xcl1P47993 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Xcl1P47993 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Xcl1P47993 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Xcl1P47993 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Xcl1P47993 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.23□□□□□ -0.29
Xcl1P47993 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.23□□□□□ -0.29
Xcl1P47993 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Xcl1P47993 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Xcl1P47993 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Xcl1P47993 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Xcl1P47993 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Xcl1P47993 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.22□□□□□ -0.29
Xcl1P47993 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Xcl1P47993 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.22□□□□□ -0.29
Xcl1P47993 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Xcl1P47993 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xcl1P47993 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xcl1P47993 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xcl1P47993 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.21□□□□□ -0.29
Xcl1P47993 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xcl1P47993 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xcl1P47993 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xcl1P47993 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.21□□□□□ -0.29
Xcl1P47993 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Xcl1P47993 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xcl1P47993 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.21□□□□□ -0.3
Xcl1P47993 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xcl1P47993 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xcl1P47993 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xcl1P47993 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xcl1P47993 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Xcl1P47993 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms