Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gli1P47806 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gli1P47806 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gli1P47806 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gli1P47806 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gli1P47806 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gli1P47806 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gli1P47806 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gli1P47806 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gli1P47806 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Gli1P47806 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.62■□□□□ 0.73
Gli1P47806 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gli1P47806 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gli1P47806 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.62■□□□□ 0.73
Gli1P47806 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gli1P47806 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.62■□□□□ 0.73
Gli1P47806 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gli1P47806 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Gli1P47806 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gli1P47806 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Golph3-202ENSMUST00000226517 2359 ntBASIC19.61■□□□□ 0.73
Gli1P47806 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.61■□□□□ 0.73
Gli1P47806 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.61■□□□□ 0.73
Gli1P47806 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Gm13241-201ENSMUST00000094493 780 ntBASIC19.61■□□□□ 0.73
Gli1P47806 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gli1P47806 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gli1P47806 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gli1P47806 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Gli1P47806 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Gli1P47806 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gli1P47806 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Gli1P47806 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gli1P47806 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gli1P47806 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gli1P47806 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gli1P47806 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.59■□□□□ 0.73
Gli1P47806 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gli1P47806 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Gli1P47806 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gli1P47806 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gli1P47806 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gli1P47806 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gli1P47806 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gli1P47806 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gli1P47806 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gli1P47806 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.58■□□□□ 0.72
Gli1P47806 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.58■□□□□ 0.72
Gli1P47806 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.58■□□□□ 0.72
Gli1P47806 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gli1P47806 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gli1P47806 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gli1P47806 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gli1P47806 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gli1P47806 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gli1P47806 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gli1P47806 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli1P47806 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gli1P47806 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.57■□□□□ 0.72
Gli1P47806 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.57■□□□□ 0.72
Gli1P47806 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.57■□□□□ 0.72
Gli1P47806 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.57■□□□□ 0.72
Gli1P47806 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli1P47806 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli1P47806 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli1P47806 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli1P47806 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.56■□□□□ 0.72
Gli1P47806 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli1P47806 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gli1P47806 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gli1P47806 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Gli1P47806 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Gli1P47806 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gli1P47806 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.56■□□□□ 0.72
Gli1P47806 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gli1P47806 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli1P47806 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli1P47806 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.55■□□□□ 0.72
Gli1P47806 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli1P47806 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli1P47806 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli1P47806 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gli1P47806 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms