Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.47■□□□□ 0.87
Vps4bP46467 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Vps4bP46467 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4bP46467 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Vps4bP46467 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4bP46467 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4bP46467 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4bP46467 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4bP46467 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4bP46467 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.46■□□□□ 0.87
Vps4bP46467 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4bP46467 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4bP46467 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4bP46467 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4bP46467 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vps4bP46467 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.45■□□□□ 0.86
Vps4bP46467 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.45■□□□□ 0.86
Vps4bP46467 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.45■□□□□ 0.86
Vps4bP46467 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4bP46467 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4bP46467 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4bP46467 Notumos-201ENSMUST00000151998 2659 ntBASIC20.44■□□□□ 0.86
Vps4bP46467 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4bP46467 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4bP46467 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4bP46467 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vps4bP46467 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.44■□□□□ 0.86
Vps4bP46467 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.44■□□□□ 0.86
Vps4bP46467 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4bP46467 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4bP46467 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4bP46467 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4bP46467 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vps4bP46467 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4bP46467 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4bP46467 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4bP46467 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4bP46467 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vps4bP46467 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.42■□□□□ 0.86
Vps4bP46467 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.42■□□□□ 0.86
Vps4bP46467 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4bP46467 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4bP46467 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4bP46467 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4bP46467 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4bP46467 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4bP46467 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4bP46467 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4bP46467 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4bP46467 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Vps4bP46467 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4bP46467 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Vps4bP46467 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.4■□□□□ 0.86
Vps4bP46467 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.4■□□□□ 0.86
Vps4bP46467 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.4■□□□□ 0.86
Vps4bP46467 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4bP46467 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4bP46467 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4bP46467 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Vps4bP46467 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4bP46467 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Vps4bP46467 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps4bP46467 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Vps4bP46467 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps4bP46467 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Vps4bP46467 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Vps4bP46467 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps4bP46467 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps4bP46467 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps4bP46467 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps4bP46467 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps4bP46467 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps4bP46467 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.39■□□□□ 0.85
Vps4bP46467 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps4bP46467 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.38■□□□□ 0.85
Vps4bP46467 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.38■□□□□ 0.85
Vps4bP46467 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.38■□□□□ 0.85
Vps4bP46467 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps4bP46467 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.38■□□□□ 0.85
Vps4bP46467 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.38■□□□□ 0.85
Vps4bP46467 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps4bP46467 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms