Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdx2P43241 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdx2P43241 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Gm11421-201ENSMUST00000122124 294 ntBASIC19.38■□□□□ 0.69
Cdx2P43241 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdx2P43241 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdx2P43241 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdx2P43241 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdx2P43241 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdx2P43241 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdx2P43241 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdx2P43241 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.37■□□□□ 0.69
Cdx2P43241 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdx2P43241 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdx2P43241 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdx2P43241 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdx2P43241 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.36■□□□□ 0.69
Cdx2P43241 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.36■□□□□ 0.69
Cdx2P43241 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdx2P43241 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdx2P43241 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdx2P43241 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.35■□□□□ 0.69
Cdx2P43241 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdx2P43241 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.35■□□□□ 0.69
Cdx2P43241 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdx2P43241 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdx2P43241 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.34■□□□□ 0.69
Cdx2P43241 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdx2P43241 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cdx2P43241 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.34■□□□□ 0.69
Cdx2P43241 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdx2P43241 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdx2P43241 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdx2P43241 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdx2P43241 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cdx2P43241 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdx2P43241 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdx2P43241 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdx2P43241 Gm27011-201ENSMUST00000182352 972 ntBASIC19.33■□□□□ 0.68
Cdx2P43241 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdx2P43241 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdx2P43241 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cdx2P43241 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdx2P43241 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdx2P43241 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdx2P43241 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdx2P43241 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.32■□□□□ 0.68
Cdx2P43241 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdx2P43241 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cdx2P43241 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdx2P43241 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Cdx2P43241 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.31■□□□□ 0.68
Cdx2P43241 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdx2P43241 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cdx2P43241 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdx2P43241 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Cdx2P43241 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdx2P43241 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdx2P43241 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.31■□□□□ 0.68
Cdx2P43241 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdx2P43241 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdx2P43241 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdx2P43241 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdx2P43241 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdx2P43241 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdx2P43241 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdx2P43241 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cdx2P43241 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cdx2P43241 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.29■□□□□ 0.68
Cdx2P43241 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdx2P43241 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdx2P43241 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdx2P43241 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.29■□□□□ 0.68
Cdx2P43241 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdx2P43241 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cdx2P43241 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdx2P43241 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdx2P43241 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdx2P43241 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdx2P43241 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdx2P43241 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdx2P43241 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdx2P43241 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdx2P43241 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdx2P43241 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdx2P43241 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.27■□□□□ 0.68
Cdx2P43241 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.27■□□□□ 0.68
Cdx2P43241 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.27■□□□□ 0.68
Cdx2P43241 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdx2P43241 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdx2P43241 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdx2P43241 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms