Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cxcl12P40224 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cxcl12P40224 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cxcl12P40224 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cxcl12P40224 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.11■□□□□ 0.97
Cxcl12P40224 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cxcl12P40224 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.11■□□□□ 0.97
Cxcl12P40224 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cxcl12P40224 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cxcl12P40224 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cxcl12P40224 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcl12P40224 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcl12P40224 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcl12P40224 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcl12P40224 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcl12P40224 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cxcl12P40224 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cxcl12P40224 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcl12P40224 Gm22240-201ENSMUST00000175225 82 ntBASIC21.09■□□□□ 0.97
Cxcl12P40224 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.09■□□□□ 0.97
Cxcl12P40224 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcl12P40224 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cxcl12P40224 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcl12P40224 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cxcl12P40224 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.08■□□□□ 0.97
Cxcl12P40224 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cxcl12P40224 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cxcl12P40224 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.08■□□□□ 0.97
Cxcl12P40224 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cxcl12P40224 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Cxcl12P40224 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cxcl12P40224 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcl12P40224 Reep4-203ENSMUST00000226563 1444 ntBASIC21.07■□□□□ 0.96
Cxcl12P40224 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.07■□□□□ 0.96
Cxcl12P40224 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.07■□□□□ 0.96
Cxcl12P40224 Gm7514-201ENSMUST00000209475 934 ntBASIC21.07■□□□□ 0.96
Cxcl12P40224 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.07■□□□□ 0.96
Cxcl12P40224 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.07■□□□□ 0.96
Cxcl12P40224 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.07■□□□□ 0.96
Cxcl12P40224 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcl12P40224 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcl12P40224 Mir5133-201ENSMUST00000174955 77 ntBASIC21.06■□□□□ 0.96
Cxcl12P40224 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.06■□□□□ 0.96
Cxcl12P40224 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcl12P40224 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcl12P40224 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.06■□□□□ 0.96
Cxcl12P40224 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcl12P40224 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cxcl12P40224 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Cxcl12P40224 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cxcl12P40224 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cxcl12P40224 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cxcl12P40224 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cxcl12P40224 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Gm20760-201ENSMUST00000179197 648 ntBASIC21.04■□□□□ 0.96
Cxcl12P40224 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.04■□□□□ 0.96
Cxcl12P40224 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cxcl12P40224 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cxcl12P40224 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcl12P40224 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cxcl12P40224 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl12P40224 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl12P40224 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Cxcl12P40224 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl12P40224 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cxcl12P40224 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl12P40224 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl12P40224 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcl12P40224 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcl12P40224 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcl12P40224 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cxcl12P40224 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcl12P40224 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.02■□□□□ 0.96
Cxcl12P40224 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcl12P40224 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcl12P40224 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl12P40224 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cxcl12P40224 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl12P40224 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.01■□□□□ 0.95
Cxcl12P40224 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl12P40224 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cxcl12P40224 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl12P40224 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.01■□□□□ 0.95
Cxcl12P40224 Gm10252-201ENSMUST00000209541 832 ntBASIC21.01■□□□□ 0.95
Cxcl12P40224 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cxcl12P40224 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.01■□□□□ 0.95
Cxcl12P40224 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl12P40224 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.01■□□□□ 0.95
Cxcl12P40224 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl12P40224 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl12P40224 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcl12P40224 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms