Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LdlrP35951 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LdlrP35951 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LdlrP35951 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LdlrP35951 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.09■□□□□ 0.81
LdlrP35951 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LdlrP35951 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.09■□□□□ 0.81
LdlrP35951 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LdlrP35951 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LdlrP35951 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LdlrP35951 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LdlrP35951 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LdlrP35951 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.08■□□□□ 0.81
LdlrP35951 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.08■□□□□ 0.81
LdlrP35951 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LdlrP35951 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LdlrP35951 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LdlrP35951 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
LdlrP35951 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LdlrP35951 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.08■□□□□ 0.8
LdlrP35951 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LdlrP35951 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LdlrP35951 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LdlrP35951 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LdlrP35951 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LdlrP35951 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.07■□□□□ 0.8
LdlrP35951 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LdlrP35951 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LdlrP35951 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.07■□□□□ 0.8
LdlrP35951 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LdlrP35951 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LdlrP35951 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LdlrP35951 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.06■□□□□ 0.8
LdlrP35951 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LdlrP35951 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LdlrP35951 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LdlrP35951 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LdlrP35951 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LdlrP35951 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.05■□□□□ 0.8
LdlrP35951 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LdlrP35951 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LdlrP35951 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LdlrP35951 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LdlrP35951 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LdlrP35951 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.04■□□□□ 0.8
LdlrP35951 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LdlrP35951 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LdlrP35951 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LdlrP35951 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
LdlrP35951 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LdlrP35951 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LdlrP35951 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LdlrP35951 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LdlrP35951 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LdlrP35951 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.03■□□□□ 0.8
LdlrP35951 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
LdlrP35951 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LdlrP35951 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LdlrP35951 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LdlrP35951 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.03■□□□□ 0.8
LdlrP35951 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LdlrP35951 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LdlrP35951 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LdlrP35951 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LdlrP35951 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LdlrP35951 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LdlrP35951 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LdlrP35951 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LdlrP35951 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.02■□□□□ 0.8
LdlrP35951 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LdlrP35951 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LdlrP35951 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LdlrP35951 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.02■□□□□ 0.79
LdlrP35951 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LdlrP35951 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LdlrP35951 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LdlrP35951 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LdlrP35951 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LdlrP35951 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LdlrP35951 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LdlrP35951 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.01■□□□□ 0.79
LdlrP35951 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms