Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.68■□□□□ 0.9
Mmp13P33435 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp13P33435 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp13P33435 Golph3-202ENSMUST00000226517 2359 ntBASIC20.67■□□□□ 0.9
Mmp13P33435 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp13P33435 Gm45102-201ENSMUST00000207427 857 ntBASIC20.67■□□□□ 0.9
Mmp13P33435 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp13P33435 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp13P33435 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp13P33435 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp13P33435 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp13P33435 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.66■□□□□ 0.9
Mmp13P33435 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Mmp13P33435 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp13P33435 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp13P33435 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.65■□□□□ 0.9
Mmp13P33435 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp13P33435 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.65■□□□□ 0.9
Mmp13P33435 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp13P33435 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.65■□□□□ 0.9
Mmp13P33435 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp13P33435 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Mmp13P33435 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mmp13P33435 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp13P33435 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp13P33435 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp13P33435 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.64■□□□□ 0.89
Mmp13P33435 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp13P33435 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.64■□□□□ 0.89
Mmp13P33435 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.64■□□□□ 0.89
Mmp13P33435 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp13P33435 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp13P33435 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp13P33435 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp13P33435 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Mmp13P33435 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.63■□□□□ 0.89
Mmp13P33435 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.63■□□□□ 0.89
Mmp13P33435 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp13P33435 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp13P33435 Iqck-206ENSMUST00000208658 2891 ntBASIC20.62■□□□□ 0.89
Mmp13P33435 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Mmp13P33435 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.62■□□□□ 0.89
Mmp13P33435 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.62■□□□□ 0.89
Mmp13P33435 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp13P33435 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.62■□□□□ 0.89
Mmp13P33435 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp13P33435 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp13P33435 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp13P33435 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp13P33435 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Mmp13P33435 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mmp13P33435 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp13P33435 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.61■□□□□ 0.89
Mmp13P33435 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp13P33435 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp13P33435 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Mmp13P33435 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.61■□□□□ 0.89
Mmp13P33435 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.61■□□□□ 0.89
Mmp13P33435 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp13P33435 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp13P33435 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp13P33435 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Mmp13P33435 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp13P33435 Gm7417-201ENSMUST00000192950 473 ntBASIC20.6■□□□□ 0.89
Mmp13P33435 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.6■□□□□ 0.89
Mmp13P33435 Gm10399-202ENSMUST00000202768 748 ntBASIC20.6■□□□□ 0.89
Mmp13P33435 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.6■□□□□ 0.89
Mmp13P33435 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp13P33435 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp13P33435 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp13P33435 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp13P33435 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp13P33435 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.59■□□□□ 0.89
Mmp13P33435 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Mmp13P33435 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp13P33435 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp13P33435 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp13P33435 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp13P33435 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp13P33435 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp13P33435 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp13P33435 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Mmp13P33435 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms