Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.8■□□□□ 0.92
Nfkb1P25799 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Nfkb1P25799 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Nfkb1P25799 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.8■□□□□ 0.92
Nfkb1P25799 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nfkb1P25799 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.8■□□□□ 0.92
Nfkb1P25799 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nfkb1P25799 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nfkb1P25799 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.79■□□□□ 0.92
Nfkb1P25799 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Nfkb1P25799 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nfkb1P25799 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nfkb1P25799 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nfkb1P25799 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nfkb1P25799 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nfkb1P25799 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nfkb1P25799 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nfkb1P25799 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nfkb1P25799 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
Nfkb1P25799 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Nfkb1P25799 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nfkb1P25799 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nfkb1P25799 Gm43173-201ENSMUST00000202246 593 ntBASIC20.78■□□□□ 0.92
Nfkb1P25799 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Nfkb1P25799 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nfkb1P25799 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nfkb1P25799 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nfkb1P25799 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nfkb1P25799 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nfkb1P25799 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.77■□□□□ 0.92
Nfkb1P25799 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nfkb1P25799 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.77■□□□□ 0.92
Nfkb1P25799 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.77■□□□□ 0.92
Nfkb1P25799 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.77■□□□□ 0.92
Nfkb1P25799 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nfkb1P25799 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nfkb1P25799 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nfkb1P25799 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nfkb1P25799 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nfkb1P25799 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nfkb1P25799 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nfkb1P25799 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.76■□□□□ 0.91
Nfkb1P25799 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nfkb1P25799 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nfkb1P25799 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nfkb1P25799 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Nfkb1P25799 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nfkb1P25799 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.75■□□□□ 0.91
Nfkb1P25799 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.75■□□□□ 0.91
Nfkb1P25799 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nfkb1P25799 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nfkb1P25799 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nfkb1P25799 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nfkb1P25799 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nfkb1P25799 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nfkb1P25799 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Nfkb1P25799 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Nfkb1P25799 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nfkb1P25799 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nfkb1P25799 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Nfkb1P25799 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.74■□□□□ 0.91
Nfkb1P25799 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nfkb1P25799 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nfkb1P25799 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nfkb1P25799 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nfkb1P25799 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nfkb1P25799 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nfkb1P25799 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nfkb1P25799 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nfkb1P25799 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nfkb1P25799 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nfkb1P25799 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nfkb1P25799 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nfkb1P25799 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.73■□□□□ 0.91
Nfkb1P25799 Spcs1-204ENSMUST00000226782 949 ntBASIC20.73■□□□□ 0.91
Nfkb1P25799 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nfkb1P25799 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nfkb1P25799 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nfkb1P25799 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nfkb1P25799 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.72■□□□□ 0.91
Nfkb1P25799 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nfkb1P25799 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.72■□□□□ 0.91
Nfkb1P25799 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nfkb1P25799 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Nfkb1P25799 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.72■□□□□ 0.91
Nfkb1P25799 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nfkb1P25799 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Nfkb1P25799 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nfkb1P25799 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nfkb1P25799 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms