Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgn1P18608 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Hmgn1P18608 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgn1P18608 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgn1P18608 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgn1P18608 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Hmgn1P18608 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.5■□□□□ 0.55
Hmgn1P18608 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn1P18608 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn1P18608 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn1P18608 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Hmgn1P18608 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hmgn1P18608 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmgn1P18608 Gm10420-201ENSMUST00000121713 882 ntBASIC18.49■□□□□ 0.55
Hmgn1P18608 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.49■□□□□ 0.55
Hmgn1P18608 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hmgn1P18608 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Hmgn1P18608 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hmgn1P18608 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmgn1P18608 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Hmgn1P18608 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn1P18608 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn1P18608 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn1P18608 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hmgn1P18608 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.48■□□□□ 0.55
Hmgn1P18608 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Hmgn1P18608 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn1P18608 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Hmgn1P18608 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn1P18608 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn1P18608 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn1P18608 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hmgn1P18608 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn1P18608 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Hmgn1P18608 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hmgn1P18608 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn1P18608 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgn1P18608 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgn1P18608 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgn1P18608 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Hmgn1P18608 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hmgn1P18608 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgn1P18608 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.46■□□□□ 0.55
Hmgn1P18608 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hmgn1P18608 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgn1P18608 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hmgn1P18608 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn1P18608 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn1P18608 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Hmgn1P18608 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.45■□□□□ 0.54
Hmgn1P18608 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.45■□□□□ 0.54
Hmgn1P18608 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn1P18608 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn1P18608 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn1P18608 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn1P18608 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn1P18608 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.44■□□□□ 0.54
Hmgn1P18608 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hmgn1P18608 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.44■□□□□ 0.54
Hmgn1P18608 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.44■□□□□ 0.54
Hmgn1P18608 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn1P18608 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmgn1P18608 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn1P18608 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Hmgn1P18608 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn1P18608 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn1P18608 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn1P18608 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn1P18608 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn1P18608 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Hmgn1P18608 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn1P18608 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn1P18608 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn1P18608 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn1P18608 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.42■□□□□ 0.54
Hmgn1P18608 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms