Protein–RNA interactions for Protein: P15388

Kcnc1, Potassium voltage-gated channel subfamily C member 1, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnc1P15388 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Kcnc1P15388 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Kcnc1P15388 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Kcnc1P15388 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Kcnc1P15388 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Kcnc1P15388 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kcnc1P15388 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Kcnc1P15388 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kcnc1P15388 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.82■□□□□ 0.76
Kcnc1P15388 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.82■□□□□ 0.76
Kcnc1P15388 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.82■□□□□ 0.76
Kcnc1P15388 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kcnc1P15388 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Kcnc1P15388 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Kcnc1P15388 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Kcnc1P15388 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Kcnc1P15388 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.81■□□□□ 0.76
Kcnc1P15388 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Kcnc1P15388 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Kcnc1P15388 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Kcnc1P15388 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Kcnc1P15388 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnc1P15388 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnc1P15388 Gm15820-201ENSMUST00000201566 728 ntBASIC19.8■□□□□ 0.76
Kcnc1P15388 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Kcnc1P15388 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnc1P15388 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnc1P15388 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnc1P15388 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnc1P15388 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnc1P15388 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.79■□□□□ 0.76
Kcnc1P15388 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
Kcnc1P15388 Gm15546-201ENSMUST00000122095 826 ntBASIC19.79■□□□□ 0.76
Kcnc1P15388 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnc1P15388 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnc1P15388 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnc1P15388 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnc1P15388 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnc1P15388 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.78■□□□□ 0.76
Kcnc1P15388 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnc1P15388 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnc1P15388 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnc1P15388 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnc1P15388 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kcnc1P15388 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kcnc1P15388 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kcnc1P15388 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.77■□□□□ 0.76
Kcnc1P15388 Gm7143-201ENSMUST00000222811 859 ntBASIC19.77■□□□□ 0.76
Kcnc1P15388 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kcnc1P15388 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnc1P15388 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnc1P15388 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnc1P15388 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Kcnc1P15388 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnc1P15388 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnc1P15388 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Kcnc1P15388 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnc1P15388 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnc1P15388 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Kcnc1P15388 Golph3-202ENSMUST00000226517 2359 ntBASIC19.76■□□□□ 0.75
Kcnc1P15388 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Kcnc1P15388 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.75■□□□□ 0.75
Kcnc1P15388 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.75■□□□□ 0.75
Kcnc1P15388 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.75■□□□□ 0.75
Kcnc1P15388 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Kcnc1P15388 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnc1P15388 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Kcnc1P15388 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Kcnc1P15388 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnc1P15388 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnc1P15388 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Kcnc1P15388 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnc1P15388 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Kcnc1P15388 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnc1P15388 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnc1P15388 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnc1P15388 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnc1P15388 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnc1P15388 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kcnc1P15388 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms