Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sod1P08228 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sod1P08228 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sod1P08228 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sod1P08228 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sod1P08228 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sod1P08228 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sod1P08228 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sod1P08228 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sod1P08228 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sod1P08228 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sod1P08228 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sod1P08228 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sod1P08228 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sod1P08228 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sod1P08228 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sod1P08228 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sod1P08228 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sod1P08228 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sod1P08228 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sod1P08228 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sod1P08228 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sod1P08228 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sod1P08228 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sod1P08228 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sod1P08228 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sod1P08228 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sod1P08228 Gm11421-201ENSMUST00000122124 294 ntBASIC19.25■□□□□ 0.67
Sod1P08228 Gm10033-202ENSMUST00000211874 928 ntBASIC19.25■□□□□ 0.67
Sod1P08228 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.25■□□□□ 0.67
Sod1P08228 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sod1P08228 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sod1P08228 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sod1P08228 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sod1P08228 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sod1P08228 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.24■□□□□ 0.67
Sod1P08228 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sod1P08228 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sod1P08228 Mir6236-201ENSMUST00000184437 123 ntBASIC19.24■□□□□ 0.67
Sod1P08228 Gm37179-201ENSMUST00000194862 823 ntBASIC19.24■□□□□ 0.67
Sod1P08228 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sod1P08228 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sod1P08228 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.24■□□□□ 0.67
Sod1P08228 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sod1P08228 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.23■□□□□ 0.67
Sod1P08228 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.23■□□□□ 0.67
Sod1P08228 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.23■□□□□ 0.67
Sod1P08228 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.23■□□□□ 0.67
Sod1P08228 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sod1P08228 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sod1P08228 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sod1P08228 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sod1P08228 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sod1P08228 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sod1P08228 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sod1P08228 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sod1P08228 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sod1P08228 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Sod1P08228 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sod1P08228 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sod1P08228 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sod1P08228 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sod1P08228 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sod1P08228 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sod1P08228 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.21■□□□□ 0.67
Sod1P08228 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.2■□□□□ 0.66
Sod1P08228 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Sod1P08228 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.2■□□□□ 0.66
Sod1P08228 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sod1P08228 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sod1P08228 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sod1P08228 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sod1P08228 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sod1P08228 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.2■□□□□ 0.66
Sod1P08228 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sod1P08228 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sod1P08228 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sod1P08228 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sod1P08228 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sod1P08228 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.19■□□□□ 0.66
Sod1P08228 Gm18671-201ENSMUST00000214826 683 ntBASIC19.19■□□□□ 0.66
Sod1P08228 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Sod1P08228 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sod1P08228 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sod1P08228 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sod1P08228 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sod1P08228 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sod1P08228 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sod1P08228 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sod1P08228 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sod1P08228 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms