Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ApoeP08226 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ApoeP08226 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.11■□□□□ 0.65
ApoeP08226 Gm27502-201ENSMUST00000183495 199 ntBASIC19.11■□□□□ 0.65
ApoeP08226 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ApoeP08226 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ApoeP08226 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.11■□□□□ 0.65
ApoeP08226 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ApoeP08226 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ApoeP08226 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ApoeP08226 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ApoeP08226 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.1■□□□□ 0.65
ApoeP08226 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ApoeP08226 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ApoeP08226 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.1■□□□□ 0.65
ApoeP08226 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ApoeP08226 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ApoeP08226 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ApoeP08226 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ApoeP08226 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ApoeP08226 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ApoeP08226 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ApoeP08226 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ApoeP08226 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ApoeP08226 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.09■□□□□ 0.65
ApoeP08226 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
ApoeP08226 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.09■□□□□ 0.65
ApoeP08226 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.08■□□□□ 0.65
ApoeP08226 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ApoeP08226 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.08■□□□□ 0.64
ApoeP08226 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ApoeP08226 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.08■□□□□ 0.64
ApoeP08226 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ApoeP08226 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ApoeP08226 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ApoeP08226 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ApoeP08226 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ApoeP08226 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ApoeP08226 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ApoeP08226 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.07■□□□□ 0.64
ApoeP08226 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ApoeP08226 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ApoeP08226 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.07■□□□□ 0.64
ApoeP08226 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ApoeP08226 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ApoeP08226 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ApoeP08226 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.06■□□□□ 0.64
ApoeP08226 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Gm7332-201ENSMUST00000118351 454 ntBASIC19.06■□□□□ 0.64
ApoeP08226 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ApoeP08226 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ApoeP08226 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.05■□□□□ 0.64
ApoeP08226 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ApoeP08226 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ApoeP08226 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ApoeP08226 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ApoeP08226 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ApoeP08226 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ApoeP08226 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ApoeP08226 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ApoeP08226 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ApoeP08226 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ApoeP08226 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ApoeP08226 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ApoeP08226 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
ApoeP08226 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ApoeP08226 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ApoeP08226 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ApoeP08226 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ApoeP08226 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ApoeP08226 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.03■□□□□ 0.64
ApoeP08226 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ApoeP08226 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ApoeP08226 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ApoeP08226 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ApoeP08226 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ApoeP08226 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ApoeP08226 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.02■□□□□ 0.64
ApoeP08226 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ApoeP08226 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ApoeP08226 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ApoeP08226 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.01■□□□□ 0.63
ApoeP08226 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ApoeP08226 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms