Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a2P08122 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.21■□□□□ 0.67
Col4a2P08122 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a2P08122 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.21■□□□□ 0.67
Col4a2P08122 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a2P08122 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a2P08122 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Col4a2P08122 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a2P08122 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.2■□□□□ 0.66
Col4a2P08122 Gm10033-202ENSMUST00000211874 928 ntBASIC19.2■□□□□ 0.66
Col4a2P08122 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.2■□□□□ 0.66
Col4a2P08122 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col4a2P08122 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a2P08122 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a2P08122 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col4a2P08122 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a2P08122 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a2P08122 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a2P08122 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a2P08122 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a2P08122 Smad6-203ENSMUST00000179458 273 ntBASIC19.19■□□□□ 0.66
Col4a2P08122 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a2P08122 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a2P08122 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a2P08122 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a2P08122 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a2P08122 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.18■□□□□ 0.66
Col4a2P08122 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a2P08122 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.18■□□□□ 0.66
Col4a2P08122 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a2P08122 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a2P08122 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col4a2P08122 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a2P08122 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a2P08122 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a2P08122 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.17■□□□□ 0.66
Col4a2P08122 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.17■□□□□ 0.66
Col4a2P08122 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a2P08122 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a2P08122 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a2P08122 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a2P08122 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a2P08122 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a2P08122 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.16■□□□□ 0.66
Col4a2P08122 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a2P08122 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a2P08122 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Col4a2P08122 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Col4a2P08122 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.15■□□□□ 0.66
Col4a2P08122 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.15■□□□□ 0.66
Col4a2P08122 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a2P08122 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Col4a2P08122 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.14■□□□□ 0.65
Col4a2P08122 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a2P08122 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a2P08122 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.14■□□□□ 0.65
Col4a2P08122 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a2P08122 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a2P08122 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Col4a2P08122 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.13■□□□□ 0.65
Col4a2P08122 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a2P08122 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.13■□□□□ 0.65
Col4a2P08122 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a2P08122 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col4a2P08122 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.13■□□□□ 0.65
Col4a2P08122 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a2P08122 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a2P08122 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a2P08122 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a2P08122 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col4a2P08122 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Col4a2P08122 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Col4a2P08122 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a2P08122 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a2P08122 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a2P08122 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Col4a2P08122 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col4a2P08122 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Col4a2P08122 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a2P08122 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col4a2P08122 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a2P08122 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a2P08122 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a2P08122 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col4a2P08122 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.1■□□□□ 0.65
Col4a2P08122 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.1■□□□□ 0.65
Col4a2P08122 Gm42642-201ENSMUST00000200683 355 ntBASIC19.1■□□□□ 0.65
Col4a2P08122 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.1■□□□□ 0.65
Col4a2P08122 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a2P08122 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms