Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfrbP05622 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfrbP05622 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PdgfrbP05622 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfrbP05622 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfrbP05622 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
PdgfrbP05622 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.44■□□□□ 0.86
PdgfrbP05622 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfrbP05622 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfrbP05622 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfrbP05622 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PdgfrbP05622 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfrbP05622 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfrbP05622 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfrbP05622 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfrbP05622 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PdgfrbP05622 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
PdgfrbP05622 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
PdgfrbP05622 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.42■□□□□ 0.86
PdgfrbP05622 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.42■□□□□ 0.86
PdgfrbP05622 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfrbP05622 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfrbP05622 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfrbP05622 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PdgfrbP05622 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfrbP05622 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PdgfrbP05622 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfrbP05622 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PdgfrbP05622 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PdgfrbP05622 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.39■□□□□ 0.85
PdgfrbP05622 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.39■□□□□ 0.85
PdgfrbP05622 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PdgfrbP05622 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PdgfrbP05622 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PdgfrbP05622 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfrbP05622 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfrbP05622 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
PdgfrbP05622 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfrbP05622 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.38■□□□□ 0.85
PdgfrbP05622 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.38■□□□□ 0.85
PdgfrbP05622 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfrbP05622 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
PdgfrbP05622 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfrbP05622 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
PdgfrbP05622 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfrbP05622 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfrbP05622 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfrbP05622 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.37■□□□□ 0.85
PdgfrbP05622 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.37■□□□□ 0.85
PdgfrbP05622 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.37■□□□□ 0.85
PdgfrbP05622 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfrbP05622 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfrbP05622 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfrbP05622 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfrbP05622 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PdgfrbP05622 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfrbP05622 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfrbP05622 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfrbP05622 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfrbP05622 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.36■□□□□ 0.85
PdgfrbP05622 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
PdgfrbP05622 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfrbP05622 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfrbP05622 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfrbP05622 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfrbP05622 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfrbP05622 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfrbP05622 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfrbP05622 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.35■□□□□ 0.85
PdgfrbP05622 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.35■□□□□ 0.85
PdgfrbP05622 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.35■□□□□ 0.85
PdgfrbP05622 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfrbP05622 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.35■□□□□ 0.85
PdgfrbP05622 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfrbP05622 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfrbP05622 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfrbP05622 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfrbP05622 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfrbP05622 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
PdgfrbP05622 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PdgfrbP05622 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfrbP05622 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfrbP05622 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms