Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.45■□□□□ 0.38
P04946 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04946 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04946 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04946 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04946 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04946 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Gm43017-201ENSMUST00000198296 752 ntBASIC17.44■□□□□ 0.38
P04946 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.44■□□□□ 0.38
P04946 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
P04946 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04946 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
P04946 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.43■□□□□ 0.38
P04946 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.43■□□□□ 0.38
P04946 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
P04946 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
P04946 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.43■□□□□ 0.38
P04946 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04946 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.42■□□□□ 0.38
P04946 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04946 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04946 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
P04946 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04946 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
P04946 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.41■□□□□ 0.38
P04946 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
P04946 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
P04946 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04946 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04946 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04946 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04946 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04946 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
P04946 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
P04946 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04946 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04946 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04946 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
P04946 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.4■□□□□ 0.38
P04946 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.4■□□□□ 0.38
P04946 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04946 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
P04946 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
P04946 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.4■□□□□ 0.38
P04946 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.4■□□□□ 0.38
P04946 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04946 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04946 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.39■□□□□ 0.37
P04946 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
P04946 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.39■□□□□ 0.37
P04946 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.39■□□□□ 0.37
P04946 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
P04946 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.39■□□□□ 0.37
P04946 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
P04946 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04946 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04946 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms