Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.57■□□□□ 0.72
Best1O88870 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.56■□□□□ 0.72
Best1O88870 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Best1O88870 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.56■□□□□ 0.72
Best1O88870 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.56■□□□□ 0.72
Best1O88870 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.56■□□□□ 0.72
Best1O88870 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Best1O88870 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.56■□□□□ 0.72
Best1O88870 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Best1O88870 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Best1O88870 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Best1O88870 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.55■□□□□ 0.72
Best1O88870 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Best1O88870 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.55■□□□□ 0.72
Best1O88870 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Best1O88870 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Best1O88870 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Best1O88870 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.54■□□□□ 0.72
Best1O88870 Gm43017-201ENSMUST00000198296 752 ntBASIC19.54■□□□□ 0.72
Best1O88870 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Best1O88870 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Best1O88870 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.54■□□□□ 0.72
Best1O88870 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Best1O88870 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Best1O88870 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Best1O88870 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Best1O88870 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Best1O88870 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Best1O88870 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Best1O88870 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.53■□□□□ 0.72
Best1O88870 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.53■□□□□ 0.72
Best1O88870 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Best1O88870 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.53■□□□□ 0.72
Best1O88870 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.53■□□□□ 0.72
Best1O88870 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Best1O88870 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Best1O88870 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Best1O88870 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.52■□□□□ 0.72
Best1O88870 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Best1O88870 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Best1O88870 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Best1O88870 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Best1O88870 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Best1O88870 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Best1O88870 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Best1O88870 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Best1O88870 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.51■□□□□ 0.71
Best1O88870 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.51■□□□□ 0.71
Best1O88870 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.51■□□□□ 0.71
Best1O88870 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Best1O88870 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Best1O88870 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Best1O88870 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Best1O88870 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Best1O88870 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.5■□□□□ 0.71
Best1O88870 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Best1O88870 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Best1O88870 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Best1O88870 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Best1O88870 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Best1O88870 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.5■□□□□ 0.71
Best1O88870 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Best1O88870 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Best1O88870 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Best1O88870 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Best1O88870 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Best1O88870 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Best1O88870 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Best1O88870 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Best1O88870 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.49■□□□□ 0.71
Best1O88870 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms