Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.69■□□□□ 0.9
ShdO88834 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
ShdO88834 Gm9870-201ENSMUST00000063874 645 ntBASIC20.69■□□□□ 0.9
ShdO88834 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ShdO88834 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
ShdO88834 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ShdO88834 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ShdO88834 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.69■□□□□ 0.9
ShdO88834 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ShdO88834 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShdO88834 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShdO88834 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
ShdO88834 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShdO88834 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShdO88834 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.68■□□□□ 0.9
ShdO88834 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShdO88834 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShdO88834 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ShdO88834 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ShdO88834 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
ShdO88834 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ShdO88834 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.67■□□□□ 0.9
ShdO88834 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.66■□□□□ 0.9
ShdO88834 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ShdO88834 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ShdO88834 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.66■□□□□ 0.9
ShdO88834 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.66■□□□□ 0.9
ShdO88834 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ShdO88834 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ShdO88834 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.66■□□□□ 0.9
ShdO88834 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ShdO88834 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ShdO88834 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShdO88834 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShdO88834 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShdO88834 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ShdO88834 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShdO88834 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ShdO88834 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShdO88834 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShdO88834 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ShdO88834 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ShdO88834 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ShdO88834 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ShdO88834 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ShdO88834 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.64■□□□□ 0.89
ShdO88834 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.64■□□□□ 0.89
ShdO88834 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ShdO88834 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ShdO88834 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
ShdO88834 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
ShdO88834 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.63■□□□□ 0.89
ShdO88834 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ShdO88834 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ShdO88834 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.62■□□□□ 0.89
ShdO88834 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.62■□□□□ 0.89
ShdO88834 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShdO88834 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.61■□□□□ 0.89
ShdO88834 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.61■□□□□ 0.89
ShdO88834 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.61■□□□□ 0.89
ShdO88834 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ShdO88834 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.61■□□□□ 0.89
ShdO88834 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShdO88834 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ShdO88834 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ShdO88834 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
ShdO88834 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ShdO88834 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ShdO88834 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ShdO88834 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ShdO88834 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ShdO88834 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms