Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClppO88696 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClppO88696 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
ClppO88696 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ClppO88696 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClppO88696 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClppO88696 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClppO88696 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.59■□□□□ 0.73
ClppO88696 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClppO88696 Gm7143-201ENSMUST00000222811 859 ntBASIC19.59■□□□□ 0.73
ClppO88696 Serp2-204ENSMUST00000228055 705 ntBASIC19.59■□□□□ 0.73
ClppO88696 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClppO88696 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClppO88696 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClppO88696 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ClppO88696 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
ClppO88696 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ClppO88696 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ClppO88696 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ClppO88696 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ClppO88696 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ClppO88696 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.57■□□□□ 0.72
ClppO88696 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClppO88696 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ClppO88696 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.57■□□□□ 0.72
ClppO88696 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ClppO88696 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ClppO88696 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ClppO88696 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ClppO88696 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ClppO88696 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ClppO88696 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ClppO88696 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClppO88696 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClppO88696 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ClppO88696 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.56■□□□□ 0.72
ClppO88696 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.56■□□□□ 0.72
ClppO88696 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClppO88696 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ClppO88696 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ClppO88696 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.55■□□□□ 0.72
ClppO88696 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.55■□□□□ 0.72
ClppO88696 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClppO88696 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClppO88696 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClppO88696 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ClppO88696 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.54■□□□□ 0.72
ClppO88696 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
ClppO88696 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ClppO88696 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.54■□□□□ 0.72
ClppO88696 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClppO88696 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.53■□□□□ 0.72
ClppO88696 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.53■□□□□ 0.72
ClppO88696 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ClppO88696 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ClppO88696 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClppO88696 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClppO88696 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClppO88696 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClppO88696 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClppO88696 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClppO88696 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.52■□□□□ 0.72
ClppO88696 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.52■□□□□ 0.72
ClppO88696 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ClppO88696 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ClppO88696 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClppO88696 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClppO88696 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ClppO88696 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClppO88696 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClppO88696 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClppO88696 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms