Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.37■■□□□ 1.01
Psmc3O88685 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Psmc3O88685 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.36■■□□□ 1.01
Psmc3O88685 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.36■■□□□ 1.01
Psmc3O88685 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Psmc3O88685 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Psmc3O88685 Gm7291-201ENSMUST00000199147 382 ntBASIC21.36■■□□□ 1.01
Psmc3O88685 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Psmc3O88685 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Psmc3O88685 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Psmc3O88685 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Psmc3O88685 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Psmc3O88685 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Psmc3O88685 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Psmc3O88685 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Psmc3O88685 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.35■■□□□ 1.01
Psmc3O88685 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.35■■□□□ 1.01
Psmc3O88685 Gm40848-201ENSMUST00000221998 324 ntBASIC21.35■■□□□ 1.01
Psmc3O88685 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Psmc3O88685 Gm10493-201ENSMUST00000097270 612 ntBASIC21.35■■□□□ 1.01
Psmc3O88685 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Psmc3O88685 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Psmc3O88685 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Psmc3O88685 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Psmc3O88685 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Psmc3O88685 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.34■■□□□ 1.01
Psmc3O88685 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Psmc3O88685 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Psmc3O88685 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Psmc3O88685 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Psmc3O88685 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Psmc3O88685 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Psmc3O88685 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Psmc3O88685 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Psmc3O88685 Gm26571-201ENSMUST00000181399 666 ntBASIC21.33■■□□□ 1.01
Psmc3O88685 Gm42569-201ENSMUST00000200539 472 ntBASIC21.33■■□□□ 1.01
Psmc3O88685 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Psmc3O88685 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.33■■□□□ 1
Psmc3O88685 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
Psmc3O88685 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Psmc3O88685 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.33■■□□□ 1
Psmc3O88685 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Psmc3O88685 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.32■■□□□ 1
Psmc3O88685 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.32■■□□□ 1
Psmc3O88685 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Psmc3O88685 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Psmc3O88685 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Psmc3O88685 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Psmc3O88685 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Psmc3O88685 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Psmc3O88685 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.31■■□□□ 1
Psmc3O88685 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.31■■□□□ 1
Psmc3O88685 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Psmc3O88685 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Psmc3O88685 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Psmc3O88685 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Psmc3O88685 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.3■■□□□ 1
Psmc3O88685 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.3■■□□□ 1
Psmc3O88685 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Psmc3O88685 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Psmc3O88685 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.3■■□□□ 1
Psmc3O88685 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.3■■□□□ 1
Psmc3O88685 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.3■■□□□ 1
Psmc3O88685 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Psmc3O88685 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Psmc3O88685 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.29■■□□□ 1
Psmc3O88685 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.29■■□□□ 1
Psmc3O88685 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Psmc3O88685 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Psmc3O88685 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.29■■□□□ 1
Psmc3O88685 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.29■■□□□ 1
Psmc3O88685 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.29■■□□□ 1
Psmc3O88685 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.29■■□□□ 1
Psmc3O88685 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.29■■□□□ 1
Psmc3O88685 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.29■■□□□ 1
Psmc3O88685 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Psmc3O88685 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Psmc3O88685 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Psmc3O88685 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.28■■□□□ 1
Psmc3O88685 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.28■■□□□ 1
Psmc3O88685 Gm42642-201ENSMUST00000200683 355 ntBASIC21.28■■□□□ 1
Psmc3O88685 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Psmc3O88685 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Psmc3O88685 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.27■■□□□ 1
Psmc3O88685 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.27■■□□□ 1
Psmc3O88685 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Psmc3O88685 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.27■■□□□ 1
Psmc3O88685 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.27■■□□□ 1
Psmc3O88685 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.27■■□□□ 1
Psmc3O88685 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.27■■□□□ 1
Psmc3O88685 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Psmc3O88685 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.27■■□□□ 1
Psmc3O88685 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Psmc3O88685 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Psmc3O88685 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Psmc3O88685 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Psmc3O88685 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Psmc3O88685 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Psmc3O88685 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Psmc3O88685 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms