Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Slc6a20bO88575 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc6a20bO88575 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Slc6a20bO88575 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Slc6a20bO88575 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc6a20bO88575 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Nespas-201ENSMUST00000143738 1083 ntBASIC22.3■■□□□ 1.16
Slc6a20bO88575 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.3■■□□□ 1.16
Slc6a20bO88575 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Slc6a20bO88575 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.29■■□□□ 1.16
Slc6a20bO88575 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.29■■□□□ 1.16
Slc6a20bO88575 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Slc6a20bO88575 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Slc6a20bO88575 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Slc6a20bO88575 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Slc6a20bO88575 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Slc6a20bO88575 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.29■■□□□ 1.16
Slc6a20bO88575 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Slc6a20bO88575 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Slc6a20bO88575 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Slc6a20bO88575 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.28■■□□□ 1.16
Slc6a20bO88575 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Slc6a20bO88575 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Slc6a20bO88575 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.28■■□□□ 1.16
Slc6a20bO88575 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.28■■□□□ 1.16
Slc6a20bO88575 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.28■■□□□ 1.16
Slc6a20bO88575 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Slc6a20bO88575 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Slc6a20bO88575 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Slc6a20bO88575 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Slc6a20bO88575 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc6a20bO88575 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.27■■□□□ 1.16
Slc6a20bO88575 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Slc6a20bO88575 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc6a20bO88575 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Slc6a20bO88575 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc6a20bO88575 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc6a20bO88575 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Slc6a20bO88575 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Slc6a20bO88575 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.26■■□□□ 1.15
Slc6a20bO88575 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.26■■□□□ 1.15
Slc6a20bO88575 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Slc6a20bO88575 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Slc6a20bO88575 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Gm13234-201ENSMUST00000120010 747 ntBASIC22.25■■□□□ 1.15
Slc6a20bO88575 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.25■■□□□ 1.15
Slc6a20bO88575 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Slc6a20bO88575 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.24■■□□□ 1.15
Slc6a20bO88575 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Gm10653-202ENSMUST00000139570 835 ntBASIC22.24■■□□□ 1.15
Slc6a20bO88575 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Slc6a20bO88575 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.23■■□□□ 1.15
Slc6a20bO88575 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Slc6a20bO88575 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Slc6a20bO88575 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Slc6a20bO88575 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Slc6a20bO88575 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.23■■□□□ 1.15
Slc6a20bO88575 Gm12441-201ENSMUST00000121806 588 ntBASIC22.23■■□□□ 1.15
Slc6a20bO88575 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Slc6a20bO88575 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.23■■□□□ 1.15
Slc6a20bO88575 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms