Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dnmt3bO88509 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.48■□□□□ 0.71
Dnmt3bO88509 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dnmt3bO88509 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.48■□□□□ 0.71
Dnmt3bO88509 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Dnmt3bO88509 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dnmt3bO88509 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dnmt3bO88509 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Gm9847-201ENSMUST00000052528 599 ntBASIC19.47■□□□□ 0.71
Dnmt3bO88509 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Dnmt3bO88509 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3bO88509 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3bO88509 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3bO88509 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.46■□□□□ 0.71
Dnmt3bO88509 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3bO88509 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3bO88509 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3bO88509 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3bO88509 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3bO88509 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3bO88509 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3bO88509 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.43■□□□□ 0.7
Dnmt3bO88509 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.43■□□□□ 0.7
Dnmt3bO88509 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3bO88509 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.43■□□□□ 0.7
Dnmt3bO88509 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3bO88509 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Dnmt3bO88509 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3bO88509 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3bO88509 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.42■□□□□ 0.7
Dnmt3bO88509 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3bO88509 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3bO88509 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Dnmt3bO88509 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3bO88509 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3bO88509 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3bO88509 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.41■□□□□ 0.7
Dnmt3bO88509 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3bO88509 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3bO88509 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Dnmt3bO88509 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3bO88509 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.4■□□□□ 0.7
Dnmt3bO88509 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Dnmt3bO88509 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.39■□□□□ 0.69
Dnmt3bO88509 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.39■□□□□ 0.69
Dnmt3bO88509 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3bO88509 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3bO88509 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3bO88509 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3bO88509 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
Dnmt3bO88509 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3bO88509 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3bO88509 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3bO88509 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3bO88509 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.38■□□□□ 0.69
Dnmt3bO88509 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3bO88509 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3bO88509 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3bO88509 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3bO88509 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms