Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.06■□□□□ 0.8
Cacna1hO88427 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.06■□□□□ 0.8
Cacna1hO88427 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1hO88427 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1hO88427 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.06■□□□□ 0.8
Cacna1hO88427 Gm9988-201ENSMUST00000069786 435 ntBASIC20.06■□□□□ 0.8
Cacna1hO88427 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1hO88427 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1hO88427 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1hO88427 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1hO88427 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1hO88427 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Cacna1hO88427 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1hO88427 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cacna1hO88427 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1hO88427 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1hO88427 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1hO88427 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1hO88427 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1hO88427 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cacna1hO88427 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.03■□□□□ 0.8
Cacna1hO88427 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.03■□□□□ 0.8
Cacna1hO88427 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 Gm5408-201ENSMUST00000197998 747 ntBASIC20.03■□□□□ 0.8
Cacna1hO88427 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1hO88427 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.03■□□□□ 0.8
Cacna1hO88427 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1hO88427 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Cacna1hO88427 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.02■□□□□ 0.8
Cacna1hO88427 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.02■□□□□ 0.8
Cacna1hO88427 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cacna1hO88427 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cacna1hO88427 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cacna1hO88427 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Cacna1hO88427 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.01■□□□□ 0.79
Cacna1hO88427 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.01■□□□□ 0.79
Cacna1hO88427 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cacna1hO88427 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cacna1hO88427 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.01■□□□□ 0.79
Cacna1hO88427 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.01■□□□□ 0.79
Cacna1hO88427 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1hO88427 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1hO88427 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1hO88427 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cacna1hO88427 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cacna1hO88427 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cacna1hO88427 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cacna1hO88427 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1hO88427 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cacna1hO88427 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20■□□□□ 0.79
Cacna1hO88427 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cacna1hO88427 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1hO88427 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.99■□□□□ 0.79
Cacna1hO88427 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cacna1hO88427 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1hO88427 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1hO88427 Trmt13-210ENSMUST00000198454 880 ntBASIC19.99■□□□□ 0.79
Cacna1hO88427 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cacna1hO88427 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1hO88427 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1hO88427 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1hO88427 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.98■□□□□ 0.79
Cacna1hO88427 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.98■□□□□ 0.79
Cacna1hO88427 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1hO88427 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.97■□□□□ 0.79
Cacna1hO88427 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.97■□□□□ 0.79
Cacna1hO88427 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.97■□□□□ 0.79
Cacna1hO88427 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 Gm6365-201ENSMUST00000054711 744 ntBASIC19.97■□□□□ 0.79
Cacna1hO88427 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1hO88427 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.97■□□□□ 0.79
Cacna1hO88427 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cacna1hO88427 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1hO88427 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.96■□□□□ 0.79
Cacna1hO88427 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1hO88427 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1hO88427 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1hO88427 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1hO88427 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1hO88427 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.95■□□□□ 0.78
Cacna1hO88427 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1hO88427 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.95■□□□□ 0.78
Cacna1hO88427 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1hO88427 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1hO88427 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms