Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tulp3O88413 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tulp3O88413 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tulp3O88413 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tulp3O88413 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tulp3O88413 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tulp3O88413 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.83■□□□□ 0.6
Tulp3O88413 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tulp3O88413 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tulp3O88413 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tulp3O88413 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.82■□□□□ 0.6
Tulp3O88413 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tulp3O88413 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tulp3O88413 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tulp3O88413 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tulp3O88413 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tulp3O88413 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
Tulp3O88413 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tulp3O88413 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tulp3O88413 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tulp3O88413 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tulp3O88413 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tulp3O88413 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tulp3O88413 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tulp3O88413 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tulp3O88413 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tulp3O88413 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Tulp3O88413 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tulp3O88413 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tulp3O88413 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.8■□□□□ 0.6
Tulp3O88413 Gm10420-201ENSMUST00000121713 882 ntBASIC18.8■□□□□ 0.6
Tulp3O88413 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tulp3O88413 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tulp3O88413 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.79■□□□□ 0.6
Tulp3O88413 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.79■□□□□ 0.6
Tulp3O88413 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tulp3O88413 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tulp3O88413 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tulp3O88413 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tulp3O88413 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tulp3O88413 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tulp3O88413 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.78■□□□□ 0.6
Tulp3O88413 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.78■□□□□ 0.6
Tulp3O88413 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tulp3O88413 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tulp3O88413 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tulp3O88413 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tulp3O88413 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tulp3O88413 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tulp3O88413 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tulp3O88413 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tulp3O88413 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.77■□□□□ 0.6
Tulp3O88413 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tulp3O88413 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tulp3O88413 Gm11175-201ENSMUST00000116172 543 ntBASIC18.77■□□□□ 0.6
Tulp3O88413 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.77■□□□□ 0.6
Tulp3O88413 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tulp3O88413 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tulp3O88413 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.77■□□□□ 0.6
Tulp3O88413 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.77■□□□□ 0.59
Tulp3O88413 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tulp3O88413 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tulp3O88413 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tulp3O88413 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.76■□□□□ 0.59
Tulp3O88413 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tulp3O88413 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tulp3O88413 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.76■□□□□ 0.59
Tulp3O88413 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tulp3O88413 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tulp3O88413 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tulp3O88413 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tulp3O88413 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tulp3O88413 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Tulp3O88413 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tulp3O88413 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tulp3O88413 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.75■□□□□ 0.59
Tulp3O88413 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tulp3O88413 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tulp3O88413 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tulp3O88413 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tulp3O88413 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Tulp3O88413 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms